Azotobacter vinelandii CA6: AvCA6_51000
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Entry
AvCA6_51000 CDS
T02634
Symbol
nifA
Name
(GenBank) Nif-specific sigma54-dependent transcriptional activator protein, NifA
KO
K02584
Nif-specific regulatory protein
Organism
avd
Azotobacter vinelandii CA6
Pathway
avd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AvCA6_51000 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avd03000
]
AvCA6_51000 (nifA)
Transcription factors [BR:
avd03000
]
Prokaryotic type
Helix-turn-helix
Other families
AvCA6_51000 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
HTH_8
AAA_5
AAA_2
AAA
Mg_chelatase
AAA_16
HTH_23
nSTAND3
AAA_7
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
AGK18375
UniProt:
M9YC39
LinkDB
All DBs
Position
5128054..5129622
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AA seq
522 aa
AA seq
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MNATIPQRSAKQNPVELYDLQLQALASIARTLSREQQIDELLEQVLAVLHNDLGLLHGLV
TISDPEHGALQIGAIHTDSEAVAQACEGVRYRSGEGVIGNVLKHGNSVVLGRISADPRFL
DRLALYDLEMPFIAVPIKNPEGNTIGVLAAQPDCRADEHMPARTRLLEIVANLLAQTVRL
VVNIEDGREAADERDELRREVRGKYGFENMVVGHTPTMRRVFDQIRRVAKWNSTVLVLGE
SGTGKELIASAIHYNSPRAHRPFVRLNCAALPETLLESELFGHEKGAFTGAVKQRKGRFE
QADGGTLFLDEIGEISPMFQAKLLRVLQEGEFERVGGNQTVRVNVRIVAATNRDLESEVE
KGKFREDLYYRLNVMAIRIPPLRERTADIPELAEFLLGKIGRQQGRPLTVTDSAIRLLMS
HRWPGNVRELENCLERSAIMSEDGTITRDVVSLTGVDNESPPLAAPLPEVNLADETLDDR
ERVIAALEQAGWVQAKAARLLGMTPRQIAYRIQTLNIHMRKI
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaaccatccctcagcgctcggccaaacagaacccggtcgaactctatgacctg
caattgcaggccctggcgagcatcgcccgcacgctcagccgcgaacaacagatcgacgaa
ctgctcgaacaggtcctggccgtactgcacaatgacctcggcctgctgcatggcctggtg
accatttccgacccggaacacggcgccctgcagatcggcgccatccacaccgactcggaa
gcggtggcccaggcctgcgaaggcgtgcgctacagaagcggcgaaggcgtgatcggcaac
gtgctcaagcacggcaacagcgtggtgctcgggcgcatctccgccgacccgcgctttctc
gaccgcctggcgctgtacgacctggaaatgccgttcatcgccgtgccgatcaagaacccc
gagggcaacaccatcggcgtgctggcggcccagccggactgccgcgccgacgagcacatg
cccgcgcgcacgcgccttctggagatcgtcgccaacctgctggcgcagaccgtgcgcctg
gtggtgaacatcgaggacggccgcgaggcggccgacgagcgcgacgaactgcgtcgcgag
gtgcgcggcaagtacggcttcgagaacatggtggtgggccacacccccaccatgcgccgg
gtgttcgatcagatccgccgggtcgccaagtggaacagcaccgtactggtcctcggcgag
tccggtaccggcaaggaactgatcgccagcgccatccactacaactcgccgcgcgcgcac
cgccccttcgtgcgcctgaactgcgccgcgctgccggaaaccctgctcgagtccgaactc
ttcggccacgagaagggcgccttcaccggcgcggtgaagcagcgcaaggggcgtttcgag
caggccgacggcggcaccctgttcctcgacgagatcggcgagatctcgccgatgttccag
gccaagctgctgcgcgtgctgcaggaaggcgagttcgagcgggtcggcggcaaccagacg
gtgcgggtcaacgtgcgcatcgtcgccgccaccaaccgcgacctggaaagcgaggtggaa
aagggcaagttccgcgaggacctctactaccgcctgaacgtcatggccatccgcattccg
ccgctgcgcgagcgtaccgccgacattcccgaactggcggaattcctgctcggcaagatc
ggccgccagcagggccgcccgctgaccgtcaccgacagcgccatccgcctgctgatgagc
caccgctggccgggcaacgtgcgcgaactggagaactgcctggagcgctcggcgatcatg
agcgaggacggcaccatcacccgcgacgtggtctcgctgaccggggtcgacaacgagagc
ccgccgctcgccgcgccgctgcccgaggtcaacctggccgacgagaccctggacgaccgc
gaacgggtgatcgccgccctcgaacaggccggctgggtgcaggccaaggccgcgcggctg
ctgggcatgacgccgcggcagatcgcctaccgcatccagaccctcaacatccacatgcgc
aagatctga
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