Azotobacter vinelandii CA6: AvCA6_51710
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Entry
AvCA6_51710 CDS
T02634
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
avd
Azotobacter vinelandii CA6
Pathway
avd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AvCA6_51710 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avd03400
]
AvCA6_51710 (recB)
Enzymes [BR:
avd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AvCA6_51710 (recB)
DNA repair and recombination proteins [BR:
avd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AvCA6_51710 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
AAA_25
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGK18633
UniProt:
M9YHQ1
LinkDB
All DBs
Position
complement(5219070..5222750)
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AA seq
1226 aa
AA seq
DB search
MSQPPTAERPLALRFPLHGSRLIEASAGTGKTFTISALYLRLVLGHGGEAGFSRELLPPE
ILVVTFTDAATRELRDRIRARLVEAAKVFREEAPGDGLLRQLRADFSAERWPACARRLDI
AAQWMDEAAVSTIHGWCQRMLREHAFDSGSLFTQTLETDHGELLAEVVRDYWRQHCYPLS
AAALGWVMEHWGHPDALLKDKLGPLLGEAQPLPAEPLGALLERALAEQAGELARLKEGWN
AWADELEALLDAAVQAKRVDGRKIQARYYRPWCEKLRAWAVGDGTDLDLGSGFARLTPEG
LAEAWKGESPRHPALEAMRALPARLRTLSGPDEPARRHAAAWVSLRFEQEKRRRAEMGFD
DMLSRLDAALRGDNGGRLAELIRGQFPVALIDEFQDTDPLQYRIFDRIYAIASNRADCGL
FLIGDPKQAIYAFRGADIHTYLRARQATEGRHYNLETNFRSSQALVSAVNRVFRLAERRE
AGHGAFLFRDGTTNPLPFLEVGAQGREEVWQIGGNAQPALNLWHLEDEAPLPGGAYRAQM
AERAASEIVRLLNLGQRGGAGFVRDGRLQPLRPSDIAILVRDFKEAEAIRGQLAARGVRS
VYLSDKDSVFASPEARDLLLWLRACAEPDVDRPLRAALASRSLGLALAELEELNRDERIW
ERRVMQFRGYRQRWQRQGVLPMLHQLLHDFDLPQRLMARPDGERALTNLLHLAELLQRAA
AGLDGEQALIRHLSELLAGEIQVAEEQVLRLESDAALVRVVTIHKSKGLEYPLVFLPFVC
AFRAVEGGRPLWVYDGERRRLVLTPGEDEVARADRERLGEELRLLYVALTRARHACWLGV
ADLCVGNARKSRLHDSALGYLLGGAVPLERSAALADWLAPLDVAGESAVLEAPEASGERF
VEQAVARSKPQWRTPARSAAEHWWIASYSALRIGAGEERLADSQIPASRFDDAAPDSPAA
QKVADDERESVFVPLRAGETPTLHRFPRGPNPGTFLHGLLEMAGREGFAALAAEPARLRE
LIARRCQLRGMTEWIDPLADWLLDLLTRPLALGGDRCVALVGLGQYQPELEFWFEARAVD
VRRIDELVQERVLPGLSRPALAKDRLNGMFKGFIDLAFEHGGRYYLLDYKSNWLGEGDAA
YSAEAMAATAASHRYDLQSVLYLLALHRQLRARLPGYDYDAHLGGALCLFLRGSRAAGQG
IHWVRPPRELIETLDALFEGKKEAEA
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgagccagccgccgaccgccgagcgcccgctggcgctacgcttcccgctgcacggcagc
cgcctgatcgaggccagcgccggtaccggcaagaccttcaccatctccgccctttacctg
cgcctggtgctcggccatggcggcgaggcgggcttttcccgcgagttgctgccgccggag
atcctcgtggtgaccttcaccgacgccgccacccgcgagctgcgcgaccgcatccgcgcg
cggctggtcgaggcggccaaggtgtttcgcgaggaggcgccgggcgacggtctgctgcgg
cagttgcgcgccgacttttccgccgagcgctggccggcctgcgcgcgccgcctggacatc
gccgcgcagtggatggacgaagcggcggtgtcgaccattcacggctggtgccagcgcatg
ctgcgcgagcacgccttcgacagcggcagcctgttcacccagaccctggagaccgaccac
ggcgaactgctcgccgaggtggtgcgcgactactggcgccagcactgctacccgctctcc
gctgcggcgctgggctgggtgatggagcactgggggcatccggatgcgctgctcaaggac
aagctgggcccgctgctcggcgaggcgcagccgctgccggccgagccgctcggtgcgctg
ctggagcgggcgctggccgagcaggccggcgaactggcccggctgaaggaaggctggaac
gcctgggccgacgagctggaagcgttgctcgatgcggcggtgcaggccaaacgggtggac
ggacgcaagatccaggcgcgctactaccggccctggtgcgagaagttgcgcgcctgggcc
gttggcgacgggacggacctcgacctcggcagcggcttcgcccgcctgacccccgagggc
ctggccgaggcctggaagggcgagtcgccgcgccatccggcgttggaggccatgcgcgcg
ctgccggcgcgcctgaggacgctgtccggccccgacgagccggcccggcgccatgccgcc
gcctgggtaagcctgcgcttcgagcaggaaaagcgccggcgcgccgaaatgggtttcgac
gacatgctgagccgcctcgacgccgccctgcggggcgacaacggcgggcgcctggccgag
ctgatccgtggccagttcccggtggcgctgatcgacgagttccaggacaccgacccgctg
cagtaccgcatcttcgaccgcatctacgccatcgcgagcaaccgcgccgactgcggcctg
ttcctgatcggcgaccccaagcaggcgatctacgccttccgcggcgccgatatccatacc
tacctgcgcgcccgccaggccaccgagggccgccactacaacctggaaaccaacttccgc
tccagccaggcgctggtttccgcggtcaatcgggtattccgcctggccgagcggcgcgaa
gccgggcacggcgccttcctgttccgcgacggcacgaccaacccgctgccctttctcgaa
gtgggcgcgcagggccgcgaagaggtctggcagatcgggggcaatgcgcagccggcactg
aatctctggcatctggaggacgaggcgccgctgcccggcggcgcctaccgcgcgcagatg
gccgaacgcgccgccagcgagatcgtccgcctgctgaacctcggccagcggggcggggcg
ggcttcgtccgggacgggcggctgcagccgctgcgccccagcgatatcgccattctggtg
cgcgacttcaaggaggccgaggcgatccgtggccaactggccgctcgcggggtacgcagc
gtctacctgtcggacaaggattcggtgttcgccagccccgaggcgcgcgacctcctgctg
tggctgcgcgcctgcgccgaaccggacgtcgaccgcccgctgcgcgccgccctggccagc
cgcagcctgggcctcgcgctggccgagctggaggaactgaaccgcgacgagcgcatctgg
gagaggcgcgtcatgcagttccgcggctaccgccagcgctggcagcgccagggcgtgctg
ccgatgctgcaccaactgctgcacgacttcgatctgccgcagcggctgatggcgcgcccc
gacggcgagcgcgcgctgaccaacctgctgcatctggccgagctgctgcagcgtgccgcc
gccgggctggacggcgagcaggcgctgatccgccatctgtccgagctgctggccggcgag
atccaggtcgccgaggagcaggtgctgcgcctggagagcgacgcggcgctggtgcgggtg
gtgaccatccacaaatccaagggtctggagtatccgctggtgttcctgccgttcgtctgc
gccttccgcgcggtggagggcggcaggccgctgtgggtgtacgacggcgagcgccgccgg
ctggtgctgacgccgggcgaggacgaggtggcgcgtgccgaccgcgagcgcctgggcgag
gaactgcgcctgctctacgtggctctgacccgcgcccgccacgcctgctggctgggcgtc
gccgacctctgcgtcggcaatgccagaaaatcgcgcctgcacgactcggcgctcggctat
ctgctcggcggcgctgtgccgctggagcgcagcgccgccctggccgactggctcgcgccg
ctggacgtggcgggtgagagcgcggtgctggaggcgcccgaagccagcggcgagcgcttc
gtcgagcaggccgtcgcccggagcaagccgcaatggcgcaccccggcgcgcagcgccgcc
gagcactggtggatcgcctcctacagcgccctgcgcatcggcgccggcgaggaaaggctg
gccgacagccagataccggccagccgcttcgacgacgccgcgccggacagcccggcggca
cagaaggtcgccgacgacgagcgcgagagcgtcttcgtgccgctgcgcgcgggcgaaacg
ccgaccctgcatcgttttccgcgcggccccaatcccggcaccttcctccacggcctgctg
gaaatggccggccgcgagggcttcgccgcgctggccgccgagcccgcgcggctgcgcgag
ctgatcgcccggcgctgccagttgcgtggcatgaccgagtggatcgatccgctggccgac
tggctgctcgacctgctgaccaggcccctggcgctcggcggggaccggtgcgtggcgctg
gtcgggctcggccagtaccagcccgaactggagttctggttcgaggcgcgcgccgtcgac
gtgcgccgcatcgacgaactggtccaggagcgggtgctgcccggcctgtcgcgtccggca
ctggcgaaggaccggctcaacggcatgttcaagggcttcatcgacctggcgttcgagcac
ggcgggcgctactacctgctcgactacaagtccaactggctgggcgagggcgatgccgcc
tacagcgccgaggcgatggcggcgaccgccgccagccaccgctacgacctacagtcggtg
ctctacctgctggccctgcaccgccagttgcgggcgcgcctgcccggctacgactacgac
gcgcacctgggcggcgcgctctgcctgttcctgcgcggcagccgcgcggcggggcagggc
atccattgggtgcgcccgccacgcgagctgatcgagacgctggatgcgctgttcgagggc
aagaaggaggccgaggcatga
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