Azotobacter vinelandii CA6: AvCA6_51720
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Entry
AvCA6_51720 CDS
T02634
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
avd
Azotobacter vinelandii CA6
Pathway
avd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AvCA6_51720 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avd03400
]
AvCA6_51720 (recC)
Enzymes [BR:
avd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AvCA6_51720 (recC)
DNA repair and recombination proteins [BR:
avd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AvCA6_51720 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AGK18634
UniProt:
M9YDS3
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All DBs
Position
complement(5222747..5226253)
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AA seq
1168 aa
AA seq
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MQGDEGLGAGLMVVHGNRLEALRELAVEWMRRHPLAPLEDEVVLVQSNGIVQWLKLALAG
RDGCGIAAAIRVELPARFLWQSYRAVLGSAGIPRESPLDKAPLTWRLMRLLPNLLEGEAF
APLRRFLEDDSDLRKRHQLAERLADLFDQYQVYRADWLADWAEGHDRLRTSRDGARPLDE
AARWQPALWRALLADVGRDTVATSRAGVHLRFVERLRGLDAPPPGLPRRVMVFGISSLPA
QALEALAALARFSQVLLCVHNPCRYHWGDIVPDQDLLRHQYRRQRRKDGMAPGLSAEDLH
QHAHPLLAAWGKQGRDYINLLDRYDDPEHYRERFASLGGRIDLFDEEDGPRPGHLLGQLQ
DDILHLRTLEETRKEWPLVDPKADRSLRFHIAHSAQREVEILHDQLLARFAADPGLRPRE
VIVMVPDVNAYAPHIQAVFGQYARDDDRYIPFSLADQGQRGCDPLPIAVEQLLKLPEGRL
TVSEVLDLLDVPALRARFAIEESDLPTLRRWIEGAGIRWGLDAERRAGLGLPAGLEQNTW
RFGLRRMLLGYAVGSGAPCAGIEPFDEIGGLEAVLIGPLVRLLEALDDLHRRLARPVAPA
EWGRILQAMLGDFFLARSERDETLLGQLGEALEEWLELCAGVDLDEPLPLGVVREAWLGL
LDRGRLSQRFLAGAVNFCTLMPMRAIPFRVVCLLGMNDGDYPRSQTPLDFDLMAGDYRPG
DRSRREDDRYLLLEALLAAREQLYVSWVGRSVRDNCERPASVLVGQLRDHLASGWRLPEE
YHEASDSEADKAKRLLAALTTEHPLQPFSRRYFEGDDALFSYAREWAALHRRDAPAGAAR
ALPPFEPDGALALETLQNFLRDPVKHFFTQRLKVHLDESMQAQLDEEPFGLDGLQLHQLR
QSLLDAASLALEDDPARVEAALEAAALRLQRSGRLPLAGFGERLREQLLKPLPEQMRRYQ
SLCSLWSTRLESPKPLWFEHEGVELAGWLGGLRENAGGALARIELQPGELKRGKDDWKWH
RLLRPWVAHVAAAACGAPLTSLLVGQDASLEFAPIEQARAQAILRLWLEAWRAGLEAPLP
VALNTAIAWLNSGEEGDEEGGTAEKAAREAYEGGYNRSGELAGSASLARQYPTFDDLIAD
RDFYEWSRDLYQSLLDHKPTELMEEDRA
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtgacgagggactgggcgccgggctgatggtggtgcacggcaaccgcctggaa
gcgttgcgcgaactggcggtggaatggatgcggcgtcatcccctggcgccgctggaggac
gaggtggtgctggtgcagagcaacggcatcgtccagtggctgaagctggcgctggccggg
cgggacggttgcggcatcgccgcggcgatccgcgtcgaactgccggcgcgctttctctgg
cagagctaccgcgcggtgctggggagcgccggtatcccccgcgaatcgccgctggacaag
gcgccgctgacctggcggctgatgcgcctgctgccgaacctgctggaaggcgaggcgttc
gctccgctgcgccgcttcctcgaagacgactccgacctgcgcaagcgccaccaactggcc
gagcgcctggccgatctgttcgaccagtaccaggtctaccgtgccgactggctggccgac
tgggccgagggccacgaccggttgcgcacctcgcgcgacggggcgaggccgctcgacgag
gcggcgcgctggcagccggcactgtggcgcgccctgctggcggatgtcggccgggacacg
gtggccaccagccgcgccggcgtgcacctgcgtttcgtcgaacgcctgcgcggcctcgat
gcgccgccgcccggcctgccgcggcgggtcatggtgttcggcatctcctcgctgccggcg
caggctctcgaggcactggccgccctggcgcgcttcagccaggtgctgctctgcgtgcac
aacccctgccggtaccactggggcgacatagttcccgaccaggacctgctgcgccaccag
taccgccgccagcggcgcaaggacggtatggcgccggggctgtccgccgaggacctgcac
cagcacgcccatccgctcctggccgcctggggcaagcagggccgcgactacatcaacctg
ctggacaggtacgacgatcccgagcattaccgcgagcgcttcgccagcctcggcgggcgc
atcgacctgttcgacgaggaggacggtcccaggcccggacacctgctcggccagttgcag
gacgacatcctccacctgcgcaccctggaggaaacccgcaaggagtggccgctggtcgat
ccgaaggccgaccgctcgctgcgtttccacatcgctcatagcgcccagcgcgaggtcgag
atcctccacgaccaactgctggcgcgcttcgccgccgaccccggcctgcgcccgcgcgag
gtgatcgtcatggtcccggacgtcaacgcctacgcgccgcacatccaggcggtgttcggc
cagtacgcccgggacgacgaccgctacatccccttcagcctcgccgaccaggggcagcgc
ggctgcgatccgctgccgatcgccgtcgaacagctactgaaactgccggaaggccggctg
accgtcagcgaggtgctcgacctgctcgacgtgccggcgctgcgcgcgcgcttcgccatc
gaggagagcgacctgccgaccctgcgccgctggatcgagggcgccggtatccgctggggc
ctggatgccgagcgccgcgccggcctcggcctgccggcgggcctggaacagaacacctgg
cgcttcggcctgcggcgcatgctgctcggctacgcggtgggcagcggcgcgccctgcgcc
ggcatcgaacccttcgacgagattggcggtctggaggccgtgctgatcggtccgctggtg
cgcctgctcgaggctctcgacgacctgcaccggcgcctggcccggcccgtcgcgccggcc
gagtggggacgcatcctgcaggccatgctgggcgatttcttcctggcccggagcgaacgc
gacgaaaccctgctcggccagctcggcgaggcgctggaggaatggctggagctgtgcgcc
ggggtcgacctggacgagcccctgccgctcggcgtggtgcgcgaggcctggctcggcctg
ctggaccggggccgcctgagccagcgctttctcgccggcgcggtgaacttctgcaccctg
atgccgatgcgcgccatcccgttccgcgtggtctgcctgctcggcatgaacgacggcgac
tacccgcgcagccagacgcccctggacttcgacctgatggccggcgactaccgtccgggc
gaccgctcgcgccgcgaggacgaccgctacctgctgctcgaagccctgctcgccgcccgc
gagcagctctacgtcagttgggtggggcgcagcgtccgcgacaattgcgagcggccggcg
tcggtgctggtcggccagttgcgcgaccatctcgccagcggctggcgcttgccggaggaa
taccatgaggcgagcgattcggaggccgacaaagcgaaaaggctgctcgcggcgctgacc
accgagcacccgctgcagccgttcagccgccgctacttcgagggcgacgacgccctgttc
agctacgcccgcgaatgggccgcgctgcaccgccgggacgcgccggccggcgcggcgcgg
gcgctgccgccgttcgagccggacggcgcgctggccctggagaccctgcagaacttcctg
cgcgatccggtcaagcatttcttcacccagcgcctcaaggtgcatctggacgagagcatg
caggcgcagctcgacgaggaacccttcggtctcgacggtctgcaactgcaccagttgcgc
cagagcctgctggacgccgccagcctggccctggaagacgatccggcgcgggtcgaggcg
gcgctggaggccgccgccctgcgcctgcagcgcagcggccggttgccgctggccggcttc
ggcgagcgcctgcgcgagcaactgctgaagccgctgccggagcagatgcggcgttaccag
agcctctgctccctgtggtcgacgcggctggaatcgcccaagccgctgtggttcgaacac
gagggcgtcgaactggccggctggctcggcggcctgcgcgagaacgccggcggggcgctg
gcgcgcatcgagctgcagcccggcgagctcaagcgcggcaaggacgactggaaatggcac
cgcctgctcaggccctgggtggcgcatgtcgccgccgcggcctgcggtgcgccgctgacc
agcctgctggtcggccaggatgcgagcctcgagttcgcgcccatcgagcaagcacgggcg
caggcgatcctccgcctgtggctggaggcctggcgcgccgggttggaggcgccgttgccg
gtggcgctgaacaccgccatcgcttggttgaattccggagaagagggcgacgaggagggg
ggcacggcggaaaaggccgcccgcgaagcctacgaaggcggttacaaccgttccggcgaa
ctggccggcagcgccagcctggcgcgccagtatccgaccttcgacgatctgatcgccgat
cgcgatttctacgaatggagccgcgacctgtaccagtcgctgctggaccataagcccacg
gaactcatggaggaggaccgcgcatga
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