Archaeoglobus veneficus: Arcve_1018
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Entry
Arcve_1018 CDS
T01451
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ave
Archaeoglobus veneficus
Pathway
ave03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Arcve_1018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ave03019
]
Arcve_1018
03009 Ribosome biogenesis [BR:
ave03009
]
Arcve_1018
Enzymes [BR:
ave01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Arcve_1018
Messenger RNA biogenesis [BR:
ave03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Arcve_1018
Ribosome biogenesis [BR:
ave03009
]
Prokaryotic type
rRNA helicases
Arcve_1018
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
AAA_19
Cas3-like_C_2
SWI2_SNF2
CMS1
P-loop_SecA
Flavi_DEAD
AAA_22
Phage_integrase
Motif
Other DBs
NCBI-ProteinID:
AEA47029
UniProt:
F2KSZ9
LinkDB
All DBs
Position
complement(881709..882878)
Genome browser
AA seq
389 aa
AA seq
DB search
MDLKFSEMNLSEGMLGLLEMHGIEEPTEIQTKAIPLVEKGFDVVAQSETGSGKTLAFAIP
IIEAAETGKGIQALVLTPTRELANQIENEFRRFSRHKGLRIANIHGGVPIEPQIRDLRRA
DVVVGTPGRLLDHVRRKTVDFSRVEYFVIDEADRMLDMGFIDDVKAIMRCTPKTRQSLLF
SATIPPEVRALASRYMKNPKTIRTKELVDPKLLNQYYYDVDDSEKFSMLVHLLRKENPKK
ALVFTNMRKTSDIVAKNLFMHGFKASVLHGGLTQSKRDRMMERFRKGEIRVLVATDVASR
GLDVKGVTHVFNYDVPSKAEDYIHRIGRTARAGKNGKAVTILGRKDHGSFRRIMVKYGLT
IERLEETFQEVPFKYVTTYRPHKGGRRRF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
ttggatttgaaatttagtgaaatgaacctgagtgaaggcatgttgggtcttctcgaaatg
cacggcattgaagaaccgacggaaatacagacgaaagccataccactggtggaaaaaggc
tttgatgtggtagcgcaatccgaaacgggctctggcaaaacgcttgcgtttgcaattcca
ataatagaggctgcagagactggaaagggtattcaggctcttgtccttacacctacaagg
gaacttgcgaaccagatagaaaacgaattcaggaggttttccagacataagggtttgaga
atagccaatattcatggtggagttcccatagagccacagataagggatttgagaagagct
gatgtggttgttggaacaccgggaagacttctcgaccacgtaagaaggaagactgttgat
ttctcgagggtagaatactttgtcatagatgaagcggacagaatgcttgacatgggcttc
atagatgacgttaaggcgataatgaggtgtacaccgaaaacgagacagagtctgctgttc
tccgccacgatacctcctgaagttagagctcttgcttcaagatacatgaaaaatcctaag
actatcaggacgaaggagcttgttgaccctaagctcttgaaccagtactactacgacgta
gatgacagcgagaagttttcgatgctagtccaccttttgaggaaggaaaatcccaagaaa
gcgctggtgttcacaaacatgcgaaagacttcggatatcgttgccaagaacctgttcatg
cacgggttcaaagcaagcgtcctccacggaggccttacgcagagtaaaagggacaggatg
atggaacgattcagaaaaggcgaaatcagagttcttgttgctacagacgttgcctcgagg
gggctggacgtcaaaggcgtcacgcacgtgtttaactacgacgttccgagcaaagcagag
gactacatccacaggatagggagaactgcaagagctggcaaaaacggaaaggctgtaacg
atactcgggcggaaagatcacggatcgttcagaaggataatggtaaaatacggactcaca
atcgagaggctggaagagacgtttcaggaagttccgttcaagtatgtgaccacgtatagg
cctcacaaaggtgggagaagaagattttag
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