Archaeoglobus veneficus: Arcve_1050
Help
Entry
Arcve_1050 CDS
T01451
Name
(GenBank) exosome complex RNA-binding protein 1
KO
K03679
exosome complex component RRP4
Organism
ave
Archaeoglobus veneficus
Pathway
ave03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Arcve_1050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ave03019
]
Arcve_1050
Messenger RNA biogenesis [BR:
ave03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Arcve_1050
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Arcve_1050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N_2
RRP40_S1
RRP4_S1
ECR1_N
S1
KH_6
KH_1
KH_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AEA47061
UniProt:
F2KT31
LinkDB
All DBs
Position
906320..907015
Genome browser
AA seq
231 aa
AA seq
DB search
MTRKIVMPGDLVSTNPRAAGYGTYVENGKVYAKILGLLDKSDTGVRIIPLKGRYIPSTGD
IVIGIVREVTANGWVVDIYSPYQAFLPLLEYPETRNRKVNEILDIGDAVIAKVLNIDPKM
KVTLTMKDKVCRPVRVGRIVAINPARVPRVIGKKGSMIRLLKSELGVQIIVGQNGLIWLN
GDRRKVSIAEEAIYIIEAEAHTEGLTDRITEFIKAKKGELENERRNTQANS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgacgagaaagattgttatgcctggagacctcgtctcgacaaatccgagagcggcaggt
tatggaacgtacgttgagaacggcaaggtgtatgccaaaattctcggattgctcgataaa
agcgacacgggcgtgaggataattcccctcaaggggaggtatatcccctcaactggggat
atcgtaataggtattgtaagggaagtaacggcaaacgggtgggtagttgacatatactca
ccctatcaggcctttctgccccttttagagtatccggaaacgagaaacagaaaagttaac
gagatcctcgatataggggatgcagtgattgcaaaggtcttgaacatcgatcccaagatg
aaggttacgctgacgatgaaggacaaggtctgcagacctgtaagggttggcagaatagtc
gccataaatccggcgagggttccgagagttatagggaaaaagggaagcatgataagactt
ctcaagtcggagcttggagtccagattatcgtcgggcagaatggcctgatctggttgaat
ggtgataggagaaaggtttcgattgctgaagaggcaatctacataattgaggccgaggcc
cataccgaaggtcttacggacaggataactgagtttataaaagcaaagaagggtgaatta
gaaaatgagcgaagaaatacccaggctaatagttga
DBGET
integrated database retrieval system
