Archaeoglobus veneficus: Arcve_1705
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Entry
Arcve_1705 CDS
T01451
Name
(GenBank) RNA-binding domain, S1
KO
K07573
exosome complex component CSL4
Organism
ave
Archaeoglobus veneficus
Pathway
ave03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Arcve_1705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ave03019
]
Arcve_1705
Messenger RNA biogenesis [BR:
ave03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Arcve_1705
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Arcve_1705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
ECR1_N_2
HypA
A2L_zn_ribbon
Zn_ribbon_3
HVO_2753_ZBP
Prok-RING_1
S1
Zn_Tnp_IS91
Trm112p
FtrD-like
Cas12f1-like_TNB
Zn_ribbon_6
DUF5905
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AEA47704
UniProt:
F2KQH1
LinkDB
All DBs
Position
1528914..1529462
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AA seq
182 aa
AA seq
DB search
MLMKFVMPGDRIGLVEEYVTGSGVYEENGEIFAAVAGKVVVKDRTVSVEPVKRIPHINKG
DVVLGRVVDVRNSMALIELARKKGFDRSLMHTGIAALHVSNVQRDYLKDINEAIRYMDII
KARVIDAENLKLSTKEPEMGVLKSLCSVCKHELVREGNTLKCPNCGNVEKRKMSTDYGKG
KW
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgaaatttgtaatgcccggagatagaatcggccttgtagaggaatacgttacc
ggaagcggcgtttatgaggagaatggagagattttcgctgccgtagccggaaaggttgtt
gtaaaggatagaactgtaagcgtcgaacccgtgaagaggattcctcacatcaacaaaggg
gacgttgtcctcggaagggttgtcgatgtgagaaactcgatggccctcatcgagcttgca
aggaagaagggttttgaccgcagtttgatgcacaccggtattgctgccctgcacgtttca
aatgttcagagggactacctcaaggacataaacgaggctataaggtacatggacataatc
aaggcgagagtcattgacgcggaaaacctgaagctttccacaaaggagcctgagatgggt
gtgctcaagtccctctgcagtgtgtgcaagcacgaactcgtgagagaagggaatactctt
aaatgccctaactgcggaaacgtggagaagcgtaagatgtccacagactacgggaagggt
aagtggtaa
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