KEGG   Archaeoglobus veneficus: Arcve_1705
Entry
Arcve_1705        CDS       T01451                                 
Name
(GenBank) RNA-binding domain, S1
  KO
K07573  exosome complex component CSL4
Organism
ave  Archaeoglobus veneficus
Pathway
ave03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ave00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Arcve_1705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ave03019]
    Arcve_1705
Messenger RNA biogenesis [BR:ave03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Arcve_1705
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     Arcve_1705
SSDB
Motif
Pfam: ECR1_N EXOSC1 ECR1_N_2 HypA A2L_zn_ribbon Zn_ribbon_3 HVO_2753_ZBP Prok-RING_1 S1 Zn_Tnp_IS91 Trm112p FtrD-like Cas12f1-like_TNB Zn_ribbon_6 DUF5905 Zn_ribbon_IS1595
Other DBs
NCBI-ProteinID: AEA47704
UniProt: F2KQH1
LinkDB
Position
1528914..1529462
AA seq 182 aa
MLMKFVMPGDRIGLVEEYVTGSGVYEENGEIFAAVAGKVVVKDRTVSVEPVKRIPHINKG
DVVLGRVVDVRNSMALIELARKKGFDRSLMHTGIAALHVSNVQRDYLKDINEAIRYMDII
KARVIDAENLKLSTKEPEMGVLKSLCSVCKHELVREGNTLKCPNCGNVEKRKMSTDYGKG
KW
NT seq 549 nt   +upstreamnt  +downstreamnt
atgctgatgaaatttgtaatgcccggagatagaatcggccttgtagaggaatacgttacc
ggaagcggcgtttatgaggagaatggagagattttcgctgccgtagccggaaaggttgtt
gtaaaggatagaactgtaagcgtcgaacccgtgaagaggattcctcacatcaacaaaggg
gacgttgtcctcggaagggttgtcgatgtgagaaactcgatggccctcatcgagcttgca
aggaagaagggttttgaccgcagtttgatgcacaccggtattgctgccctgcacgtttca
aatgttcagagggactacctcaaggacataaacgaggctataaggtacatggacataatc
aaggcgagagtcattgacgcggaaaacctgaagctttccacaaaggagcctgagatgggt
gtgctcaagtccctctgcagtgtgtgcaagcacgaactcgtgagagaagggaatactctt
aaatgccctaactgcggaaacgtggagaagcgtaagatgtccacagactacgggaagggt
aagtggtaa

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