Archaeoglobus veneficus: Arcve_1826
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Entry
Arcve_1826 CDS
T01451
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ave
Archaeoglobus veneficus
Pathway
ave03410
Base excision repair
ave03430
Mismatch repair
ave03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Arcve_1826
03430 Mismatch repair
Arcve_1826
03440 Homologous recombination
Arcve_1826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ave03400
]
Arcve_1826
DNA repair and recombination proteins [BR:
ave03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Arcve_1826
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Arcve_1826
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Arcve_1826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
Sec3_C-term
Motif
Other DBs
NCBI-ProteinID:
AEA47822
UniProt:
F2KR16
LinkDB
All DBs
Position
complement(1628166..1629410)
Genome browser
AA seq
414 aa
AA seq
DB search
MPMDGFLNHDFIKKMTQMGEMIKEYSGEHAVIVHHNDADGICSAAILSKLCELLDLSVNL
ICIEKVHSSIVETIHNRYEGEVVIYTDLAGLAAEMIDKVNDGRCTVWIIDHHPAKSVESE
TVFVFDPELFGVSGDTFVSASTLNYLLSACIHEKMKSYAYLAVIGSVGDYHDRSGGVLGF
DRFVLDEAVDLGQAKIKIEGQKERYYIQFFDEFADVVAERLTTLGVVAYEKKGYRKGLKA
CFEGFDEETINEVEKLKEIRDKKFEEAIYMLRNGGLHIEKYSQWFHVGDIFSPMGVKAVG
EFCQMIKDMVFLKEDRYILGFQNCPKYVPDIGEFEWDVVKLSGRVPLALEKRILMGQAPG
LDVLIPAATEEVGGIADATHRIAAATLIDRGMEGYFIRAFEEAAEREFARLSKD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggatggcttcctgaaccacgacttcatcaagaagatgacccagatgggagag
atgataaaagagtactccggtgaacacgccgtaatagttcaccacaacgacgcagacggt
atatgctccgctgcgattctatccaagttgtgcgaacttctcgacctcagcgttaattta
atctgcatcgaaaaggtgcactcctcaattgtagaaacgattcacaacaggtacgaggga
gaggtggtaatctatactgaccttgcaggacttgccgccgagatgattgacaaggtcaac
gatggcaggtgcactgtgtggattatcgaccaccacccggcaaagtctgttgaaagcgaa
accgtatttgtgtttgaccccgaactcttcggagtctccggagatacgttcgtctctgca
tccacgctgaattacctgctgagcgcgtgtatacacgaaaagatgaagagctacgcgtac
cttgcagtcataggctcggttggcgactaccacgatcgctcaggcggagttctcggcttc
gacaggttcgtgctcgacgaggcggtagatctcgggcaggcaaagataaaaatcgaagga
caaaaggagagatactacatccagtttttcgacgagttcgctgatgttgttgcagaaagg
ctgaccacgctgggtgtcgttgcctacgagaagaaggggtacaggaaggggttaaaagca
tgttttgagggattcgacgaggagactatcaatgaggtcgaaaagctcaaggaaattaga
gacaagaagttcgaagaagcaatatacatgctgaggaacggcggtttgcacattgagaag
tactcgcagtggttccacgttggagacatcttctctccaatgggtgttaaggccgttggc
gagttctgccagatgataaaagacatggtcttcctcaaggaggacaggtacatcctcgga
ttccagaactgccccaagtacgtcccagacatcggagagttcgagtgggatgtggtaaag
ctcagtggtagggttccactggcactcgaaaagaggatcctcatgggccaggctcccgga
ctggatgtgcttattccggctgcaaccgaggaagttggtggaattgccgatgcaacccac
agaattgccgcagcaacgttgatagaccgaggaatggaagggtatttcatcagggcgttc
gaagaggctgcggagagggagttcgccaggctcagcaaggactga
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