Agrobacterium vitis VAR03-1: RvVAR031_00090
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Entry
RvVAR031_00090 CDS
T08810
Name
(GenBank) glycosyl transferase family A
KO
K16564
succinoglycan biosynthesis protein ExoU [EC:2.4.-.-]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00543
Exopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
RvVAR031_00090
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
avf01003
]
RvVAR031_00090
Glycosyltransferases [BR:
avf01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RvVAR031_00090
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GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
Glyco_tranf_2_2
Glyco_tranf_2_4
Motif
Other DBs
NCBI-ProteinID:
BCH52399
LinkDB
All DBs
Position
1:5898..6914
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AA seq
338 aa
AA seq
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MTMNSTVCVIIAAKNAGATVARAVRSALAEAETHEVIVVDDGSMDGTGAEALSADDNSGR
LRIIRFDHNRGPAAARNCAIEASTAPLLAILDADDFFLPGRFTQMMAEDHWDFIADNIVF
VKEECVSQVSTDVKRFRRQARLLVLEDFIAGNISQRGAQRGEIGFLKPVMRRDFLDRHSL
RYNEKLRLGEDYDLYARALVAGARYKIIHSCGYGAVVRHDSLSGKHRTEDLKRLYEADRS
ILANPNLTQEQRSLLTQHEKHIRDRYELRHFLDLKNNQGAFSAIAYAATHPTAIPAIIGG
IAADKKDMLMGSGPRPQSAQSSGSLRYLLPVIADADQR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaattccaccgtatgcgttatcattgccgctaaaaacgctggcgccaccgtg
gcacgggcggtacgttctgccttggcggaagccgaaacgcatgaagtgatcgttgtcgat
gatggatcgatggatggcactggcgcagaagcgctatccgccgatgacaacagcgggcgc
ttgagaattatccgttttgaccataatcgcggccccgccgctgcgcgtaactgcgccatt
gaagcatcgacggcacctttgctggctattctcgatgcagatgattttttcctgccagga
cgcttcactcagatgatggctgaagaccattgggatttcatcgccgacaatatcgttttt
gtaaaagaggaatgcgtttcccaggtcagtaccgacgtcaaacgtttccggcgtcaggcc
cgccttttggtgcttgaggatttcattgccggaaatatttcccaaagaggcgcgcaacgc
ggggaaatcggctttctcaagccggtgatgcgccgcgattttctggatcgccatagcctg
cggtataatgaaaagctccgcctcggtgaagattatgatctttacgcgcgcgcactcgtc
gctggcgcccgctacaaaatcattcatagttgcggctatggtgccgttgttcgtcatgat
tcgctcagcggcaaacatcgcaccgaagatctcaagcggctttacgaagctgaccgctcc
attcttgccaatccaaacctgacgcaggaacagaggtcactgttgacccaacacgaaaag
cacatccgcgaccgctatgagttgcgccatttcctcgatttaaagaataatcagggtgca
ttttcagccatagcctatgcggcgacacaccctacggccataccggccatcatcggcggg
attgcggccgataaaaaggacatgctgatgggcagtggaccacgccctcaatctgctcaa
tcctcggggtctctgcgctatctcctgcctgtcatcgcagatgcagaccagagatag
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