Agrobacterium vitis VAR03-1: RvVAR031_00530
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Entry
RvVAR031_00530 CDS
T08810
Name
(GenBank) DNA-3-methyladenine glycosidase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RvVAR031_00530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avf03400
]
RvVAR031_00530
Enzymes [BR:
avf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RvVAR031_00530
DNA repair and recombination proteins [BR:
avf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RvVAR031_00530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BCH52443
LinkDB
All DBs
Position
1:complement(68585..69238)
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AA seq
217 aa
AA seq
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MAEMMRIRNQADLATGLEALLDIDPRLHAIAREAGPLPLRLTEPGFEGLAFIIVSQMVSR
ASADAIWRRLCGAMGTAEPAAYLALGDAALSLGLSRAKHACLSGLASATQAGDIDLLAIL
DQPVETGIAELTRLRGIGLWTSEVYLMFCGGHADVFPAGDVALRAAVGDGLCLAARPDIR
ETTRIALAWRPYRAIAARLFWAFYAARLRREAAPVPV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatgatgcgaattcgcaaccaagcggatcttgccaccggccttgaggctttg
ctggatatcgatccccggctgcatgccattgcccgcgaagccggacctttgccgctccgg
ttgacggaaccgggttttgaagggctggccttcatcatcgtctcgcaaatggtgtcgcgc
gccagtgccgacgccatctggcggcggctttgcggggcgatgggaacagccgaacccgcc
gcctatctggcgctgggtgacgcagcgctttcgctcggtctctcgcgcgccaagcatgcc
tgcctgagcggtctggcctctgccacccaggctggagacattgacctcttggccatcctc
gatcagccggtggagacaggcattgccgagttgacccggctgcgtggcattgggctgtgg
acatcggaagtttatctgatgttttgtggcggtcacgcagatgtgtttccggcaggtgat
gtggcgttgcgggcggctgtgggagatggcctttgccttgccgcgcgcccggacatccgc
gaaaccacccggattgcactggcctggcggccataccgcgccattgcggcacggttgttc
tgggccttttatgcggcgcgtttacgacgcgaagcggcgccggtgccggtctga
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