Agrobacterium vitis VAR03-1: RvVAR031_01070
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Entry
RvVAR031_01070 CDS
T08810
Symbol
fliF
Name
(GenBank) flagellar M-ring protein
KO
K02409
flagellar M-ring protein FliF
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RvVAR031_01070 (fliF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
avf02044
]
RvVAR031_01070 (fliF)
02035 Bacterial motility proteins [BR:
avf02035
]
RvVAR031_01070 (fliF)
Secretion system [BR:
avf02044
]
Type III secretion system
Flagellar export apparatus
RvVAR031_01070 (fliF)
Bacterial motility proteins [BR:
avf02035
]
Flagellar system
Flagellar assembly proteins
M, S, P and L rings
RvVAR031_01070 (fliF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YscJ_FliF
YscJ_FliF_C
Class_2_docking_dom
Motif
Other DBs
NCBI-ProteinID:
BCH52497
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Position
1:complement(120186..121874)
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AA seq
562 aa
AA seq
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MNLFNQLLQVFKNLSSLGPTKLWTLAGVGVVSVALVIGAAFFINKPAFETLYVGLEATDV
NQISIALAEAGVGFQTGADGKSIQVQAGMTGKARLLLAERGLPNSTNAGYELFDNVGSLG
LTSFMQEVTRVRALEGEIARTIQQINGIAAARVHIVMPDVGNFRRGAQKPTASVMIRAGS
DAGRKSAASIRHLVASAVPGLEVDDVTILDSTGQLLASGDETGGTANRNLGVAQSVQQEI
ESNIDKALAPFLGMDNFRSSVTAQLNTDQQQIQETVYDPESKVERSTRTTKEAQKSQQRQ
SDTAATVEQNIPQAAPQAGGAGPESSDQQDKKEEQTNYEINSKTIATVKNGYTLDKLSVA
VVVNKQRIATMVGEPVDQAKIDAYLAEMQKIVKSAAGLDDKRGDVVTLTAMDFLENQLLS
EAPTGPGVMEILSRNMAGIINSLAFLAVAFLVVWMGIRPMVRSMGGGGSAALEGGSDAVA
GLELPDFSPGLDAGAGGGLMDGFGSDFGFDSADDVLALDNDPNGGFNRRVKEGPERRLAR
MVEISEERAAKILRKWAVENAA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgttcaatcaactactccaggtcttcaagaacctttcgtccttgggacctaca
aaactatggacccttgcgggtgttggcgtcgtttcggtggcgctggttatcggtgcggcg
ttttttatcaataagcctgcctttgagaccctctacgtcggcctcgaagcgacagacgtc
aatcaaatcagtattgccctggctgaagcgggcgtcggtttccagactggcgccgatggc
aaaagcattcaggtccaggctggcatgaccggcaaggcccgtttgttgctggccgaacgc
ggcctgcccaatagcaccaatgctggctacgaactgttcgataatgtcggctccctaggt
ctgacatccttcatgcaggaagtgacccgggtgcgcgcccttgagggcgagattgccagg
acgatccagcagatcaacggtattgcggcagcacgcgtgcatatcgtcatgccggatgtc
gggaatttccggcgcggcgcgcaaaagccaacggcctcggtgatgatcagagccggttcc
gatgccggtcgcaaatctgcggcttcgatccgccatctggtggcttcggctgtcccaggt
cttgaagtcgatgatgtcaccattctggattcgaccggccagttgctggcatcgggcgat
gagacgggcggcactgcaaaccggaatctcggcgttgcccagtcggttcagcaggaaatc
gaatcgaatatcgacaaggctctcgcaccttttctcggtatggacaatttccgttccagc
gtgacggcgcagttgaataccgaccagcagcagatccaggaaacggtttacgatcccgaa
tccaaggtcgaacgctcgacccgcaccaccaaggaagcacagaagtcgcagcagcggcaa
tccgataccgcagcgaccgtggagcagaatattccgcaggcagcgccgcaagcgggtggt
gccggtcctgaatcgtccgaccagcaggacaagaaggaagagcagaccaactacgaaatc
aacagcaagacgattgccaccgtcaagaacggctatacgctggacaaactgtccgtggcc
gttgtggtcaacaagcagcgtatcgccaccatggtcggcgagcctgtcgatcaggccaag
atcgatgcctatctggcggaaatgcagaaaatcgtcaaatcggctgccgggctggatgac
aagcgcggcgacgtggtgacgctgacggcgatggacttcctggagaaccagctgctgagc
gaggctccaaccggacccggtgtcatggaaatcctcagccgcaacatggcgggtattatc
aactcgcttgccttcctcgccgttgccttccttgttgtctggatgggcattcggccgatg
gtacgctcgatgggcggcggtgggtctgcggcgcttgagggtggcagcgacgctgttgcc
ggactggaactgcccgacttctcgcccggtcttgatgctggtgccggcggcgggctgatg
gatggctttggttccgacttcggctttgatagcgccgatgatgtccttgccctcgacaat
gacccgaatggcggctttaaccgccgcgtcaaggaaggaccggaacggcgcctggcgcgt
atggtggaaatctcggaagagcgcgctgccaagatcctacgcaaatgggcggtcgagaac
gcagcctga
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