Agrobacterium vitis VAR03-1: RvVAR031_01320
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Entry
RvVAR031_01320 CDS
T08810
Symbol
nuoF_1
Name
(GenBank) formate dehydrogenase subunit beta
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00630
Glyoxylate and dicarboxylate metabolism
avf00680
Methane metabolism
avf01100
Metabolic pathways
avf01120
Microbial metabolism in diverse environments
avf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RvVAR031_01320 (nuoF_1)
09102 Energy metabolism
00680 Methane metabolism
RvVAR031_01320 (nuoF_1)
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GFIT
Motif
Pfam:
Complex1_51K
NADH_4Fe-4S
SLBB_2
SLBB
Motif
Other DBs
NCBI-ProteinID:
BCH52522
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Position
1:complement(151698..153266)
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AA seq
522 aa
AA seq
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MSEPMSITVFVPRDAAALAVGADKVAATIKREAAARHVDVTIIRNGSRGLLWLETLVEVR
TEHGRIAYGPVKPSDVTGLFDAGFLTGAAHPLCHGLTSDIPFLKNQTRLTFSRCGITDPL
SLEDYRHYKGLTGLAKAIAMPPTDIVAQVTESGLRGRGGAGFPTGIKWKTVADAKADQKY
IVCNADEGDSGTFADRMIMEGDPFVLIEGMAIAGIAVGATKGYVYTRSEYPHAIAMMREA
IEIARKQGILGASVLGSTYAFDMEVREGAGAYVCGEETSLLNSLEGKRGVVRAKPPLPAL
EGLFGKPTVVNNVMSLASIPVIMDRGAQFYRDYGVGRSHGTIPIQIAGNVKHGGLYETAF
GLTLGEIINDIGGGTLTGRPVKAVQVGGPLGAYFPPSLFDTVFDYEAFTAAGGLIGHAGI
VVFDDSADMLKQARFAMEFCAVESCGKCTPCRIGSTRGVETVDRIAKGIEPEKNKVLLED
LCNTMKFGSLCALGGFTPYPVMSAMTHFPQDFAPAPLVEAAE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagccgatgagcatcaccgttttcgttccccgggatgccgctgctctggcggtc
ggggctgataaagttgccgccactatcaagcgggaagctgcggcacgccatgtcgatgtg
acgatcattcgcaatgggtcgcgcggcctgctttggttggaaaccctggttgaagtgcgc
acggagcacggtcggattgcctatggccccgtcaagccttccgatgtcactggcctgttc
gatgccgggtttttgaccggggctgcccatccgctctgtcacggtctgaccagcgatatt
ccgttcctgaagaaccagacgcggctgaccttttcccgctgcggcattaccgatccgctg
tcgctggaggactatcggcattacaagggcctgactggtctcgccaaagcgattgccatg
ccgcccaccgacattgtcgcccaggtcaccgaaagcggccttcgtggtcgcggcggggcg
ggctttccgaccggcatcaaatggaaaaccgtggcggacgccaaagccgaccagaaatac
atcgtttgcaatgccgatgaaggcgatagcggcacctttgccgaccggatgatcatggag
ggtgatcccttcgtgctgatcgaaggcatggcgattgccgggatcgcggtcggtgccacc
aagggctatgtctacacccgctcggaatatccccatgccatcgccatgatgcgtgaagcc
atcgagatcgcccgcaagcagggtattctgggagcatccgtgttaggctctacttacgct
ttcgacatggaggtccgagaaggtgctggcgcctatgtctgtggtgaggaaacctcactg
ctcaacagcttggaaggcaagcgcggcgtggtacgggccaagccgccgcttccggcgctg
gaagggctgtttggcaagccaaccgttgtcaacaatgtcatgtcgctggcctccattcct
gttatcatggaccgcggcgcgcagttctaccgcgattatggcgttggccggtcgcatggc
accatcccgatccagattgctggcaatgtcaaacacggtggcctttacgagaccgccttt
ggcctgacgctgggcgagatcatcaacgatatcggtggcggcaccttgacgggccgtccg
gtaaaggcggtgcaggtgggcggcccgcttggggcctattttccgccctcgctgttcgat
acggtgttcgactatgaagcctttaccgcagccggtggcttgatcggtcatgccgggatc
gtggtcttcgatgacagcgccgatatgctgaaacaggcccggtttgccatggagttctgt
gctgtcgaaagctgcggcaaatgtacgccctgtcggattggctcgacacggggcgtcgaa
accgtggaccggattgccaagggcattgagcctgaaaagaacaaggtgctgctggaagat
ctctgcaacaccatgaaattcggatcgctttgcgcactgggcggctttacgccctatccc
gtcatgagcgcgatgacgcatttcccgcaggattttgcgcctgccccccttgttgaagcg
gcggagtaa
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