Agrobacterium vitis VAR03-1: RvVAR031_01450
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Entry
RvVAR031_01450 CDS
T08810
Symbol
xerC
Name
(GenBank) tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avf03036
]
RvVAR031_01450 (xerC)
Chromosome and associated proteins [BR:
avf03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RvVAR031_01450 (xerC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_2
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
BCH52535
LinkDB
All DBs
Position
1:167842..168810
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AA seq
322 aa
AA seq
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MYETINHEGPAVTELLLIAAPDLMAERQNWLASLSGQRRLADHTLTAYERDTRQFLGFLT
GYFGGPPSIDDIKALRPSDLRAFLSSRRKEGAGARSLGRHLAGVRSLLRYLERKGLVNAA
GAGAIRSPKQPKSLPKPLSAAQALTVVAAETQLNEEPWIAARDAAVFALLYGCGLRISEA
LNLTPADIVATTTTLRVTGKGNKTRLVPLLPIVRQAVESYQSLCPYHLPGAEPLFRGARG
GKLQQGIIQREMQRLRSALGLPDTATPHALRHSFATHLLSGGGDLRTIQELLGHASLSTT
QIYTGVDSARLLDVYDRAHPRA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
ttgtatgagacgatcaatcacgaaggccctgccgtgacagaactgctgttgattgccgcc
cccgacctgatggcggaacgccagaactggcttgcgagcctgtctggacaaaggcggctc
gccgatcatacgctgaccgcctatgaacgcgatacccgtcagtttctgggatttttgacc
ggttatttcggcggtcctccgtcaatcgatgatatcaaggcgttacggccttccgacctg
cgtgcatttttgtcgtcacgccgcaaggaaggtgctggcgctcgttcgctcgggcgccat
ctcgccggtgtgcggtcgctcttgcgctatctggagcgcaagggcctggtcaatgccgcc
ggtgccggtgccatccgctctcccaagcagccgaaatcgttgcccaagccgctcagtgcc
gcccaggctttgacggtggtggccgcggaaacacaattgaatgaggagccttggatcgcg
gcacgggacgccgcagtttttgctttgctctatggctgtggcctgcgcatttctgaagcg
ctgaacctcacacccgccgatatcgtcgccacgacgaccacgctacgggtgactggcaaa
ggcaacaagacccgcctcgtgccactcctgcccattgtgcggcaagcggttgaatcctat
caaagcctctgcccctatcacctgccaggcgcagagccattgtttcgcggggcgcgcggc
gggaaattgcagcaaggcatcatccagcgggaaatgcagcgcttgcgctcggcactcggt
ctgcccgataccgcaacgccacatgcattgcgccattcctttgccacccatctgctgagc
ggcggcggcgacctgcgcaccattcaggaattgctcggccatgccagcctgtccaccacc
cagatctataccggtgtggattcggcacggctgctggatgtgtatgaccgcgcgcatccc
cgcgcgtga
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