Agrobacterium vitis VAR03-1: RvVAR031_02120 Help Entry RvVAR031_02120    CDS       T08810                                  Symbol dapF Name (GenBank) diaminopimelate epimerase   KO K01778   diaminopimelate epimerase [EC:5.1.1.7] Organism avf  Agrobacterium vitis VAR03-1 Pathway avf00300   Lysine biosynthesis avf00470   D-Amino acid metabolism avf01100   Metabolic pathways avf01110   Biosynthesis of secondary metabolites avf01120   Microbial metabolism in diverse environments avf01230   Biosynthesis of amino acids Module avf_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine Brite KEGG Orthology (KO) [BR:avf00001]  09100 Metabolism   09105 Amino acid metabolism    00300 Lysine biosynthesis     RvVAR031_02120 (dapF)   09106 Metabolism of other amino acids    00470 D-Amino acid metabolism     RvVAR031_02120 (dapF) Enzymes [BR:avf01000]  5. Isomerases   5.1  Racemases and epimerases    5.1.1  Acting on amino acids and derivatives     5.1.1.7  diaminopimelate epimerase      RvVAR031_02120 (dapF) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DAP_epimerase GBBH-like_N Motif Other DBs NCBI-ProteinID:  BCH52602 UniProt:  A0A6S6MKP8 LinkDB All DBs Position 1:complement(233452..234363) Genome browser AA seq 303 aa AA seqDB search MGNRVEFAKMNGLGNKILVVDMRDRTDRVTPQAAIALAGDAETHFDQIMAIHDPKLAGTF AYIDIINCDGTLAQACGNGTRCVVQALSAETGLKAFTFQTLAGILNAVEHEDGSVSVDMG GPVFDWNRIPLSEEFHDTSRIELQIGPIDAPVLHSPAVMSMGNPHAVFWVDRDPMSYDLE RFGPLLENHPLFPEKANITLAQVTSRTAMTTRTWERGAGLTLACGSAACAAGVSAARTGR TERKVTITVASSPNRQALDIEWRERDGHVIMTGAAEWEWAGQLDPQTGAWQREQQVGHEA SVS NT seq 912 nt NT seq  +upstreamnt  +downstreamnt atgggcaatcgggtcgaattcgcgaagatgaacgggcttggcaacaagatcctggtcgtc gacatgcgtgaccgcaccgaccgggtcacgccgcaggcggccattgcgctggcgggcgac gctgaaacccatttcgaccagatcatggcgatccatgatcccaagctggcgggtaccttc gcctatatcgacattatcaattgcgatggcacgctggcgcaggcctgcggcaatggtacg cgctgcgtggtgcaggccctgtcggcggaaaccggtctgaaggctttcaccttccagacg ctggctggcattctcaatgctgtcgagcatgaagacggctcggtgtctgtggatatgggg gggccggtgttcgactggaaccgcatcccgctgtcggaagaatttcacgataccagccgg atcgaattgcagatcgggccgattgatgcgccggtgctgcattcgcctgccgtgatgtcg atgggcaatccacatgcggtgttctgggtggaccgcgacccgatgtcctatgatctggaa cggttcgggccgctgctcgaaaaccatccgctgtttcccgaaaaggccaatattaccctg gcgcaggtgacatccagaaccgcgatgaccacccgcacctgggagcggggcgctgggctg acgctggcctgcggttccgccgcgtgcgccgccggggtttccgcagcccgcaccgggcgc accgagcgcaaggtgacgatcaccgtcgcctccagccccaaccgccaagccctcgacatc gaatggcgcgagcgtgacgggcatgtgatcatgaccggtgcggcagaatgggaatgggca ggacagcttgatccgcagaccggcgcctggcagcgtgagcagcaggtgggccacgaggcc tcggtctcgtga

DBGET integrated database retrieval system