Agrobacterium vitis VAR03-1: RvVAR031_02880
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Entry
RvVAR031_02880 CDS
T08810
Name
(GenBank) capsular polysaccharide biosynthesis protein
KO
K07265
capsular polysaccharide export protein
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
RvVAR031_02880
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Gene cluster
GFIT
Motif
Pfam:
Capsule_synth
DUF6716
Motif
Other DBs
NCBI-ProteinID:
BCH52678
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Position
1:complement(307466..308692)
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AA seq
408 aa
AA seq
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MRGIDVRKVNFCSGDVIFWRKWPFDFFRGRDDAWPGFLERLILRHGITDVLMLGDGRPKH
AAAVALCTRLGLRAHIFEHGYLRPDWLTVEPFGMSSQSRFPVDPQAIVALTQGVEAPPPR
NPYPSSFLTYALYDLIYHVPNVALGWLLHPHYKAHGPVHPVVEYSGWIVKGLTARRRKAQ
ALRLQHRYLATDREFDFYLFPLQLPGDYQIRRHAPMGDLFRILQAVIRSFAVHAPSGSRL
LFKTHPIDNGLRDWSSEIARMAERCGIAHQVDVIDGGDLTALIRASRGLVTVNSTVGLTA
LQHAVPVMALAPAIYDVPGLTHQQSLASFWQAPELPDATLLDHLIHAMTATIQLPGGFIG
KRAITDGATAMADRLLTETKPLAREPSPERSRFRYESELLELEAVGLR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcattgacgtgcgtaaggtcaatttttgttcaggtgatgtcattttctggaga
aaatggccttttgatttttttcgtggccgggatgatgcctggcccggatttcttgaacgg
ctcattctgcgccatggcattaccgatgtgttgatgctgggcgatggccgccccaaacac
gctgccgccgttgcgctatgcaccaggcttggcctgcgcgcccatattttcgaacatggc
tatctgcggcccgactggttgacggtggagccgttcggcatgtccagccagtcgcgtttt
ccagtcgatccgcaggcaatcgtggctttgacgcagggcgtcgaggctcctccgccgcgc
aacccctatccctccagctttctcacctatgcgctttatgacctgatctatcatgtcccg
aatgtcgcgctcggctggctgctgcatccgcattacaaggcgcatggtcctgtccatccc
gtcgtggaatatagtggctggatcgtcaagggcctgaccgcgcgccggcgaaaggcacaa
gcattgcgcctgcagcaccgctatctggcgacggacagagagttcgacttctatcttttt
ccgctgcaattgccgggggattaccagatccgccgccatgcgccgatgggcgatctattt
cgcatcctgcaagccgtgatccgttcctttgccgtccatgcgccatccggcagcaggttg
ctgttcaagacccatccgatcgacaatggactgcgcgactggtcatcagaaatcgcccgc
atggcggagcgctgcggtatcgcccatcaggttgatgtgatcgatggcggtgacctgacc
gccctgataagggcaagccgcggcctggtgacggtaaactccacggtcggcctgacggcg
ctgcaacatgctgtcccggtcatggcgcttgccccggcaatctacgacgtccccggcctc
actcaccaacaaagcctcgccagcttctggcaggcacccgaattgcctgacgccaccctg
ctcgatcacctgatccacgccatgaccgccaccatccaactccccggcggcttcattggc
aaacgtgccatcactgacggtgccacggcaatggccgacagactgctgactgaaacaaaa
ccacttgcccgtgagccttcaccggagcgtagccgttttcggtatgagagtgagcttttg
gaattggaggcagtgggattgaggtaa
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