Agrobacterium vitis VAR03-1: RvVAR031_02890
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Entry
RvVAR031_02890 CDS
T08810
Name
(GenBank) capsular polysaccharide biosynthesis protein
KO
K07265
capsular polysaccharide export protein
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
RvVAR031_02890
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Capsule_synth
DUF6716
Motif
Other DBs
NCBI-ProteinID:
BCH52679
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Position
1:308907..310259
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AA seq
450 aa
AA seq
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MTSVEPTKAVLFLQGPPSILWTEFARAFEQAGVKTHHVNFTLGDFLFWRKRGAKNYRGSF
SKWPAYLRRLIAEKGITDIVYYADRLPYHAKAAEIGAEIGVRCHAVEWGYLRPDWLTFER
DGMGRFSHFPNDPKAIRAIAAKVEEPDIAVKYPHTFGQEAFNEVIYNLLNFFGRPFYPLY
NADKYYSALVDYLPWLLKAGVKPARLPEGFLEDGQPPFYLVALQLQSDYQIRANSPYRHL
RDMMRQVIASFVKNAPAGSKLLFKQHPLDNGLERWNKVLRHIAREFKIEDRVVFIEEGDL
HDILEKTAGVVIVNSTVGLHSLRAQKPTIVLGCAVFDVPGLTHQGRLDDFWKRPEPVDPE
LMRDLVKAMAATIQIKGDFFNKAGRQAAIGAMVQRVIEGTVNMPDAFIDPPPRLTSPKGI
LTVLGRPVELDWEEDAAVPDMTYARSGPIR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagttgagccgacaaaggccgtattgttccttcaggggcctccctccattctc
tggacggaatttgcaagagcttttgaacaagcgggtgtaaaaacccatcatgtgaatttt
acgctgggcgattttctgttctggcgcaaacgtggcgccaaaaattaccgcggttccttt
tccaaatggccagcctatctgcggcggctgattgccgaaaaaggcattaccgatatcgtt
tattatgcggaccgcctgccctatcacgccaaagctgccgaaatcggcgctgaaatcggg
gtgcgctgtcatgcggtcgaatggggctatctgcggccggactggctgacattcgagcgc
gacggcatgggccgcttttcgcattttcccaacgatccgaaggctattcgcgccattgcc
gccaaggtggaagagcctgatatcgcggtgaaatatccgcatacgttcggccaggaagcc
ttcaacgaggtgatttataacctgctgaacttcttcggcagacccttctatccgctctat
aatgccgacaaatattattctgctctggtggattatctaccttggctgctgaaagcgggc
gtcaagcctgcccgcctgccggaagggtttctggaggacggccagccgcctttctatctc
gtcgccttgcaattgcagagcgattaccagatccgtgccaattcaccctatcggcatctg
cgcgacatgatgcggcaggtgatcgcctctttcgtcaaaaatgcgccagccggtagcaag
ctgctgttcaaacagcacccgctcgacaatggcctggagcgttggaacaaggtgcttcgc
catatcgcccgcgagttcaagattgaggaccgcgtcgtctttatcgaagaaggcgacctg
catgatattctggaaaagacggcgggtgttgtcatcgtcaattctacggttggccttcac
agcctgcgtgcccaaaagccaaccatcgtgctaggctgcgccgtgtttgacgtgccgggg
ctgacccatcagggccggctggatgatttctggaagcggccggagccggtcgatcccgag
ttgatgcgcgatctcgtcaaggccatggccgcgaccattcagatcaagggcgacttcttc
aacaaggctggccgtcaggcggccattggcgccatggtgcagcgggttatcgagggaacg
gtcaatatgcccgacgccttcatcgatccgccgccgcggcttacctcgcccaagggtatc
ctgactgtattgggaagacccgtcgaactcgattgggaagaagacgcggcggtgcctgat
atgacctatgcgcggtccggcccaatccgctga
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