Agrobacterium vitis VAR03-1: RvVAR031_03690
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Entry
RvVAR031_03690 CDS
T08810
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf03030
DNA replication
avf03430
Mismatch repair
avf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RvVAR031_03690
03430 Mismatch repair
RvVAR031_03690
03440 Homologous recombination
RvVAR031_03690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avf03032
]
RvVAR031_03690
03400 DNA repair and recombination proteins [BR:
avf03400
]
RvVAR031_03690
Enzymes [BR:
avf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RvVAR031_03690
DNA replication proteins [BR:
avf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RvVAR031_03690
DNA repair and recombination proteins [BR:
avf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RvVAR031_03690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
KH_BICC1
Motif
Other DBs
NCBI-ProteinID:
BCH52759
LinkDB
All DBs
Position
1:419176..420216
Genome browser
AA seq
346 aa
AA seq
DB search
MVEVKSHEFDGFLQKSVRHYKMFLIYGPDVGLVAERAAALAKSIGVALDDPFSVIRLDSS
DLQSDPGKLLDEMNALGLFGGDRLVWIRGVANEKSVVDGLQILAKDPPESSCLILEAGDL
KKGSATRKIAEPARNIAVIPCYQDDARAINALIDAEFSAAGKRLTPAARSLLSESLGGDR
RASRNEISKLLLYCLHDDLVDETHVEQIIGDASAVSTDEAVDAVLAGNADALLHAVQKIA
TSKTPMFLVLQGCLRQFQLLDIMRSEMDEKRQQASQVMQTLGRQIHFKRKPLFEKSLKNW
PSDALAVEMRRLQAAILASRRQPSLEDSLSLQTLLAITLQSARRSR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagtcaagtcacacgaattcgatggctttctgcaaaaatcggtccgtcactac
aagatgttcctgatctatggcccggatgtcggccttgtggctgagcgggccgcagccctt
gccaaatcgattggcgtggcacttgacgatcccttctcggtcattcggctggacagtagc
gacctgcaaagcgatccgggaaaactattggatgaaatgaatgctctcggcctcttcggc
ggtgaccgattggtctggatcagaggcgtcgccaatgaaaaaagcgtggtggatgggctg
caaattcttgccaaggacccgcctgaatccagttgtctcatccttgaggctggggatctc
aaaaagggatctgcgacccgcaaaatagccgaaccggcccgaaatattgcagttattccc
tgctatcaggacgatgcacgcgccatcaatgccttgattgacgcggagttcagcgctgct
ggaaaaagactgacgcctgcggctcgctccctgctcagtgaaagtctgggcggtgaccgc
cgggcatctcgcaatgagatatccaagctgctgctctattgtctgcatgacgatctcgtc
gatgaaacccatgtcgaacagattatcggcgatgctagtgctgtttcgaccgatgaggcg
gtggatgccgtgcttgctggcaatgccgatgccctgctccatgccgtccagaaaatcgcc
acctccaaaacgcccatgttccttgttctccagggttgccttcgacagtttcagttactg
gacatcatgcggagtgaaatggacgaaaagcgtcaacaggctagccaagtcatgcaaacg
cttggccgtcagatccatttcaagcgaaagccactgtttgaaaaatccttaaagaattgg
ccatccgacgctcttgcagtcgagatgcggcgattacaggcggctattctcgccagcaga
cgtcagccatcattagaagacagcctgtcgctccaaaccctactggccattaccctgcaa
tcggccaggagaagccgctaa
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