Agrobacterium vitis VAR03-1: RvVAR031_04530
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Entry
RvVAR031_04530 CDS
T08810
Symbol
chrR
Name
(GenBank) anti-sigma-E factor ChrR
KO
K07167
putative transcriptional regulator
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
RvVAR031_04530 (chrR)
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Gene cluster
GFIT
Motif
Pfam:
Cupin_7
Cupin_2
zf-HC2
Motif
Other DBs
NCBI-ProteinID:
BCH52843
LinkDB
All DBs
Position
1:517599..518291
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AA seq
230 aa
AA seq
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MTVHHHVSDELLLDYANGSLAEGWSIAIATHLALCPNCRQRLSTMEATAGALLEAEKPVD
ADRSVDRSWQDMRARLTASGERTRESTVSRVEASPDATHRQRDAILPEPLRSYLGQDIDG
LKWKSLGRGAYHIPIKTRDGETSVRLLRIPAGKPVPEHSHGGRELTLVLKGSFHDGQGRF
ARGDLEEADEQLEHQPIAEDGEDCICLAVTDAPLRFKSRLVRLFQPILGI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcaccatcatgtcagcgatgaattgctgctcgattacgccaatggcagtctt
gccgaaggctggagtattgccattgccacccatctcgccttgtgtcccaattgtcgccag
cgcctttcgaccatggaggctaccgccggggcgttgctggaagcggaaaaacctgttgat
gccgatcgtagcgtcgaccgctcctggcaagatatgcgagcaaggctgacggcctccggc
gagcggaccagggaaagcaccgtaagccgggttgaggcgtcgccggacgccacccaccgg
cagcgcgatgcgatcctgccggaaccgcttcgctcttatctggggcaggatatcgatggt
ttgaaatggaagtcgcttgggcgcggtgcctatcacattccgatcaagacccgcgatgga
gaaaccagcgtgcgactgctgcgcattccggccggaaagccggtgccggaacatagccac
ggcgggcgcgagttgacgctggtgctgaaaggcagcttccacgatggacaggggcggttt
gcccgtggcgacctggaggaagccgacgagcagttggaacatcagcctattgctgaagac
ggcgaagactgcatttgcctagccgtgaccgacgctcctctgcggtttaagagccgcctt
gtccggctgtttcagccgatcctcggtatatag
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