Agrobacterium vitis VAR03-1: RvVAR031_05220
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Entry
RvVAR031_05220 CDS
T08810
Symbol
rsmC
Name
(GenBank) methyltransferase
KO
K00564
16S rRNA (guanine1207-N2)-methyltransferase [EC:
2.1.1.172
]
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avf03009
]
RvVAR031_05220 (rsmC)
Enzymes [BR:
avf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.172 16S rRNA (guanine1207-N2)-methyltransferase
RvVAR031_05220 (rsmC)
Ribosome biogenesis [BR:
avf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RvVAR031_05220 (rsmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTS
Methyltransf_25
Methyltransf_12
Methyltransf_31
UPF0020
MTS_N
Methyltransf_PK
Eco57I
Methyltransf_32
TRM5-TYW2_MTfase
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
BCH52912
LinkDB
All DBs
Position
1:594370..595386
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AA seq
338 aa
AA seq
DB search
MSRETLKTIFHPFVTEAVALPGEDERFLFLGAEAGFVKPEGFGAELTVVQGFRPDFRRLE
AARQSPVAVVAGEDYDGALVLAGKHKGLNENRVAEALARVRAGGVIIVAGAKEDGIQPLR
KQIDRLGLEPQSLPKYHGIAVWFTVPDDKVAAIAALASKPVMVEGRFETYAGQFSHMHAD
PGSELLVSRLPEDFDGNAADFGAGWGYLSVMLAEKARRTNRIDLFEANYDSLEQAKKNLA
RNCPNLTARFFWQDLGAEPPKEKYDLVIMNPPFHEGHATEPSIGEAMIKAASEALRGGGD
LLMVANRGLAYEPVLAANFRQHGETCRNARYKVLWAKK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgaaaccctgaagaccatttttcacccctttgtcaccgaagctgttgctctt
ccaggcgaagacgaacgcttcctgtttctcggcgctgaggctggctttgtgaagccggaa
ggctttggtgccgaattgaccgtggtccaaggtttccgacccgattttcgccgcctggag
gcagcccgtcagtcgccggttgctgttgttgctggtgaggattatgatggcgcgctggtt
ctggctggcaagcacaagggtctcaacgaaaaccgcgttgcggaagcgctggcgcgtgtc
cgggccggtggcgtcatcattgtggcaggtgccaaggaagacggtattcagccgctgcgc
aagcagatcgaccgccttggcctcgagccgcaatccctgccgaaatatcacggcattgcc
gtgtggttcaccgtgcctgacgataaagttgccgcgattgccgcgctcgcttccaagccg
gtcatggtcgagggccggtttgaaacttatgccgggcagttttcccatatgcatgccgat
cccggctctgaactgctcgtcagccggttgccggaggatttcgacggcaatgccgccgat
tttggcgctggttggggctatctgtcggtgatgctggctgagaaggcgcggcgcaccaac
cgtatcgacctgttcgaggccaactacgattcactggaacaggcaaagaagaacctggcc
cgcaactgccctaacctgacggcgcgcttcttctggcaggatctgggcgctgagccgccc
aaggaaaaatacgatctggtcatcatgaaccctcccttccacgaaggccatgcgacggag
ccatcgattggcgaggccatgatcaaggccgccagtgaggccctgcgcggtggcggagac
ctgctgatggttgccaatcgcggcctcgcctatgagccggttctggccgctaattttcgt
cagcatggcgagacctgccgcaatgcacgttacaaggtgctgtgggcgaagaaataa
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