Agrobacterium vitis VAR03-1: RvVAR031_05330
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Entry
RvVAR031_05330 CDS
T08810
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
RvVAR031_05330 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
avf03011
]
RvVAR031_05330 (rpsA)
Ribosome [BR:
avf03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
RvVAR031_05330 (rpsA)
Bacteria
RvVAR031_05330 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
BCH52923
LinkDB
All DBs
Position
1:603803..605506
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AA seq
567 aa
AA seq
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MSVSTPTRDDFAALLEESFAKTDLAEGYVAKGIVTAIEKDVAIVDVGLKVEGRVPLKEFG
ARAKDGQLKVGDEVEVYVERIENALGEAVLSREKARREESWIKLEAKFEAGERVEGVIFN
QVKGGFTVDLDGAVAFLPRSQVDIRPIRDVTPLMHNPQPFEILKMDKRRGNIVVSRRTVL
EESRAEQRSEIVQNLEEGQVVEGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEI
LSIGQSVKVQIIRINQETHRISLGMKQLESDPWDGIAAKYPVGKKISGTVTNITDYGAFV
ELEPGIEGLIHISEMSWTKKNVHPGKILSTSQEVDVVVLEVDPSKRRISLGLKQTLENPW
QAFAYSHPAGAEVEGEVKNKTEFGLFIGLEGDVDGMVHLSDLDWNRPGEQVIEEYNKGDV
VRAVVLDVDVEKERISLGIKQLGKDSVGDAAASGDLRKNAVVSCEVIAVNDGGVEVKLVN
HEDIVSFIRRADLARDRDDQRPERFSVGQVFDARVTNFSKKDRKVMLSIKALEIAEEKEA
VAQFGSSDSGASLGDILGAALKNRSND
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtttctaccccgacacgggacgatttcgcggccctgctggaagaatccttcgca
aagaccgatctggccgaaggctatgttgccaagggcatcgtgacggccatcgagaaggac
gtcgctatcgttgacgttggcctcaaggtcgaaggccgcgttccgctgaaggaatttggc
gctcgcgccaaggacggccagctgaaagttggcgacgaagttgaagtttacgtcgagcgc
attgaaaacgcgctgggcgaagctgttctgtcgcgcgaaaaggcccgtcgcgaagaaagc
tggatcaagctcgaagccaagttcgaagctggcgagcgcgttgaaggcgttatcttcaac
caggtcaagggtggcttcaccgtcgatctggacggcgccgttgccttcttgccgcgctcc
caggtggatatccgcccgatccgcgacgtgaccccgctgatgcacaacccgcagcccttc
gaaatcctcaagatggacaagcgtcgcggcaacatcgttgtttcgcgccgtacggttctc
gaagagtcccgcgccgagcagcgttctgaaatcgttcagaacctcgaagaaggccaggtt
gttgaaggcgtcgtcaagaacatcaccgattacggtgcgttcgttgacctcggcggcatc
gacggcctgctgcatgtcaccgacatggcatggcgtcgtgtgaaccatccttcggaaatc
ctgtccatcggccagtcggtcaaggttcagatcatccgtattaaccaggaaacccaccgc
atctcgctcggcatgaagcagctcgagtcggatccatgggatggcattgctgccaagtac
ccagttggcaagaagatctccggtaccgtgaccaacataaccgactacggtgcattcgtt
gagctggagccgggcatcgaaggcctgatccacatttccgaaatgtcctggaccaagaag
aacgtacaccccggcaagatcctgtccaccagccaggaagttgacgtggttgttctcgaa
gtcgatccgtccaagcgtcgtatctcgcttggcctgaagcagaccctcgaaaacccatgg
caggcatttgcctacagccatccggctggcgctgaagttgaaggcgaagttaagaacaag
accgaattcggcctgttcatcggcctcgaaggcgacgttgacggcatggttcacctgtcg
gatctcgactggaaccgtccgggcgagcaggtcatcgaagaatacaacaagggcgacgtc
gttcgcgccgttgttctcgatgtggatgtcgaaaaggagcgtatctcgctcggcatcaag
cagctcggcaaggattcggtcggtgatgccgccgcttccggcgatctgcgcaagaatgct
gtcgtgtcctgcgaagtgatcgcggtcaatgacggtggcgtcgaagtcaagctcgtcaac
catgaagacatcgtgtccttcatccgccgcgccgacctcgctcgtgaccgtgacgaccag
cgtcctgagcgcttctccgttggccaggtttttgacgctcgcgtcaccaacttctccaag
aaggaccgcaaggtcatgctgtcgatcaaggcactggaaatcgctgaagagaaggaagcc
gttgctcagttcggttcgtccgatagtggcgcttcgctcggcgacatcctgggcgcagcc
ctgaagaaccgcagcaacgactaa
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