Agrobacterium vitis VAR03-1: RvVAR031_05460
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Entry
RvVAR031_05460 CDS
T08810
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RvVAR031_05460 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
avf01007
]
RvVAR031_05460 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avf03016
]
RvVAR031_05460 (pheT)
Enzymes [BR:
avf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
RvVAR031_05460 (pheT)
Amino acid related enzymes [BR:
avf01007
]
Aminoacyl-tRNA synthetase
Class II (U)
RvVAR031_05460 (pheT)
Transfer RNA biogenesis [BR:
avf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RvVAR031_05460 (pheT)
Prokaryotic type
RvVAR031_05460 (pheT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
BCH52936
LinkDB
All DBs
Position
1:615158..617581
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AA seq
807 aa
AA seq
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MKFTLSWLKDHLDTDATLDQVCERLTAIGLEVEDIDDKAAYKPFVIAKILSAEKHPSADR
LKILSVDAGDGKPVQVVCGAPNARAGLIGAFGRPGMYVPGLDVTLAVGNIRGVESHGMMC
SEKELNMSDNHDGIIDLPDDAPVGTSFAAYAGIDDPVIEINLTPNRPDCTSIYGIARDLA
ASGLGTLKQPKTPSFAVEGETSVEVKLELDDAKLCPGFAYRLVRGVKNGPSPVWMQKRLI
AIGLRPISALVDVTNYMTFDQGRPMHVFDADKVKGALTVRRAKDGEEILALDTRTYKLTP
NTVVIVDDNGVESIGGIMGGEHSGCDENTSNVLIESALWDPINIAKSGRSLGIITDARYR
FERGVDPDYMVPGLERTTELVLEMCGGVAATTKVVGYQGHTKKVVDFPFSEVKRLTGLNV
STDESRSILTGLGFEVSGEGETVKVAVPSWRPDVDGKADLVEEVMRMHGVDKITPEPLPS
IGAVNSKILTTLQIRTRTAKRALASRGMMEAVTWSFISAEQAALFGGGSAALKLVNPIAA
DMSDMRPSLLPGLLTAAQRNADRGFGDVAIFEVSGTYEGDTPEGQRRVAGGVRRGTASLA
GAGRMWSNAAKGGGKPVDVYDAKADALAVLEACGLPVGNVQIEQGGPEWYHPGRSGTIKM
GPKVVLGYFGEFHPKTLAALDVSGALCGFEVYLDAMQEPKKKATRTKPALDLSPLQMVKR
DFAFVVEKQVEAGAIIKAATSADRKLITGVNVFDVFEGASVGEGKKSVAIEVLIQPSDKT
LTDEDFDALTKKIVGNVEKTTGGALRA
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcacactctcctggttgaaagaccatctggacaccgatgccacgctggatcag
gtctgcgagcgccttaccgccattggccttgaagttgaggatatcgatgacaaggcggcc
tataagccgtttgtgattgccaagattttgagcgcggaaaagcatccgtctgccgatcgt
ctgaaaattctctcggtcgatgcgggtgacggtaaaccggtgcaagtggtttgcggcgcg
ccgaatgcgcgggcgggcttgattggcgcgtttggccgtccgggcatgtatgtgccgggg
ctggatgtgacactggccgttggcaatattcgtggcgttgagagccatggcatgatgtgt
tctgaaaaagaactcaacatgtccgataaccacgatggcattatcgatctgcctgatgat
gcgcctgtcggtacctctttcgcggcctatgctggcattgatgatccggtcatcgagatc
aatctcacgcctaaccggcccgattgcaccagcatttacggcattgcccgagatctggcg
gcctccggccttggcacgttgaagcagcccaaaactccaagctttgcggtggaaggcgag
acttcggttgaggtcaagctggagttggatgatgccaagctttgccccggctttgcctat
cgcctcgtgcgcggcgtcaaaaatggcccaagcccggtctggatgcaaaagcggctgatt
gccattggcctgcgcccgatttcggcgctggtggatgtgaccaattacatgacctttgat
caaggtcggcctatgcatgtgtttgatgccgataaggtcaagggcgcgctcaccgtgcgt
cgtgccaaggatggtgaggaaattctcgctctcgacacccgcacctataagctgacaccc
aataccgtggtgattgtcgatgacaatggcgttgaatccattggcggtatcatgggcggc
gagcattccggctgcgatgaaaacaccagtaatgtgctgattgaatcggccctgtgggac
ccgatcaacattgccaaatcgggccgctcgcttggcatcatcaccgatgcccgctatcgg
tttgagcgcggcgttgacccggactatatggtgcccggccttgagcgcaccactgaactg
gtgctggagatgtgtggcggtgtggctgccaccaccaaggtggttggctatcagggccac
acgaaaaaggtggttgatttcccattctcggaagtcaagcgcctcaccgggctgaatgtt
tccaccgacgaatcccgctccatcctcaccggccttggctttgaggtgtctggcgagggc
gaaaccgtcaaggtggccgtgccatcctggcggccggatgtggacggcaaggccgatctg
gtggaagaggtcatgcgcatgcatggcgtggataagatcacgccagagccgctgccctcc
ataggcgcggtcaacagcaagatcctcaccaccttgcagatccgtacccgcacagccaag
cgggcgctggccagccgtggcatgatggaagcggtgacgtggtccttcatctcggcagaa
caggctgccctgtttggcggcggtagcgcggcgctgaaactggtcaacccgattgccgct
gacatgtcggacatgcggccgtcgctgctgccgggcctgctcaccgctgcccagcgcaat
gccgaccggggttttggcgatgtggcgattttcgaagtctctggcacctatgaaggcgat
acgcctgaaggtcagcgccgcgtggcaggcggcgtgcgccgtggtacggcatcgctggca
ggtgcgggccgcatgtggtcgaatgctgccaagggcggcggcaagccggtggatgtctat
gacgccaaggccgatgctcttgccgtgctggaagcctgcggtctgcccgtgggcaatgta
cagatcgagcagggtgggccggaatggtatcatccgggccgctccggcaccatcaagatg
gggccaaaggtcgtgcttggctatttcggcgagttccaccccaagacgctggccgcgctg
gatgtgtccggtgcgctctgcggctttgaggtctatctcgatgccatgcaggagccgaag
aaaaaggccacccgcaccaaaccagcactggatctctcgcccttgcagatggtgaagcgc
gattttgcctttgtggttgaaaagcaggttgaggcgggcgcgatcatcaaggccgccacc
agcgccgaccgcaaactgatcaccggcgtcaacgtgtttgacgtgtttgaaggcgcaagc
gttggcgaaggcaagaaatcggttgccatcgaagtgctgatccagccatcggacaagacc
ctgaccgatgaggattttgacgcgctgaccaagaagatcgtcggcaatgtggagaagacc
acaggcggtgcgctacgcgcctga
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