Agrobacterium vitis VAR03-1: RvVAR031_05550
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Entry
RvVAR031_05550 CDS
T08810
Symbol
ctpB
Name
(GenBank) peptidase
KO
K02278
prepilin peptidase CpaA [EC:
3.4.23.43
]
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
avf01002
]
RvVAR031_05550 (ctpB)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
avf02044
]
RvVAR031_05550 (ctpB)
02035 Bacterial motility proteins [BR:
avf02035
]
RvVAR031_05550 (ctpB)
Enzymes [BR:
avf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.23 Aspartic endopeptidases
3.4.23.43 prepilin peptidase
RvVAR031_05550 (ctpB)
Peptidases and inhibitors [BR:
avf01002
]
Aspartic peptidases
Family A24: type IV prepilin peptidase family
RvVAR031_05550 (ctpB)
Secretion system [BR:
avf02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
RvVAR031_05550 (ctpB)
Bacterial motility proteins [BR:
avf02035
]
Pilus system
Pilus assembly proteins
RvVAR031_05550 (ctpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_A24
Motif
Other DBs
NCBI-ProteinID:
BCH52945
LinkDB
All DBs
Position
1:complement(627487..628005)
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AA seq
172 aa
AA seq
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MLAVTLSLIFPLCLALAAFTDLFEMKIPNAIPLVLLIGFGALAFVLGLPLGLTGLHLAAG
LIVFFGCFTLFAVNVMGGGDAKLLTAAAVWYGFNISLVEFLIEVAVFGGVLTLMILALRS
QANTVMALGLRLPRSLIVEKKIPYGIAIAIGGFCSFLSAPVVTLALATVSPK
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgctggctgttacgctgtcactgatctttcccctttgtctggcactggcggcctttacc
gatttgttcgagatgaagatccccaatgccatccccctcgtactgcttatcggcttcggc
gcccttgctttcgttcttggcctacctctaggtttgaccggcctgcatctcgcagcgggc
ctgatcgtgtttttcggttgcttcacgctgtttgccgtcaatgtcatgggcggcggcgac
gccaagcttttgacggctgctgcggtttggtatggtttcaatatcagcctggtggaattt
ctgattgaagtcgcggtattcggcggcgtgctgaccctgatgatcctggctttgcgcagc
caggccaatacggtgatggcccttgggctacgtcttccgcgctcgctgattgtcgagaaa
aaaattccctatggcatcgccattgccattggcggtttttgcagttttctcagtgcccca
gtggtgacattggccttggcgacagtttcgccgaaataa
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