Agrobacterium vitis VAR03-1: RvVAR031_05670
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Entry
RvVAR031_05670 CDS
T08810
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_05670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_05670
Enzymes [BR:
avf01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
RvVAR031_05670
Transporters [BR:
avf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RvVAR031_05670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
DUF7625
AAA_16
RsgA_GTPase
Mg_chelatase
AAA_30
AAA_22
ABC_ATPase
AAA_21
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BCH52957
LinkDB
All DBs
Position
1:complement(636394..638184)
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AA seq
596 aa
AA seq
DB search
MRDTIKTSLPESSESITAVLKRVIAENGRDHVRGYVFAIICLATVALTTAFTAWIMETVI
NEAFANKRADLVWIICVSIFIAFSLRGLASYGQAVALSKIGNNIVARYQKRLFSHLMTLS
MGYFNEARSAHLAAQVSQNVNGIRDVLNLTVTSTARDLLSLIGLIAVMLAKDWVLTLIVF
VVAPPVLYSLRYISKRLRKATTDSVMLNSRVLGAMQESVQGIAVVKAFTMEEELGRKVEG
IIDSAESRANRIARLSERTSPITESFAGLAIAAVIAYASYRTIAGGMLPGAFFSFIAALL
MAYEPAKRLAKLQIQMERAVVNARMIYAILDTQPHQRDKPGAGELKVTEARIEFKDIHFA
YGNGPEILKGVDITAEGGKTTALVGPSGAGKSTIITLIPRFYDPPQGQILIDGQDIADVT
KASLRKHIAYVSQHPYLFEGTIRDNIRYGRPEATDADVEEAARLAHAHDFILAQPYGYET
PVGENGLTLSGGQRQRLSIARALVRNAPILLLDEATSALDTESEAAVQKALDEAMNGRTV
VVIAHRLSTVVKADKIVVMQDGRVVEVGNHRTLTERPEGLYARLNNMQATNGSPSL
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgacaccatcaagacctccctgccagaatcctcggaaagcattacggcagttctt
aagcgggtcatcgccgaaaacggccgcgatcatgtgcgcggctatgtcttcgccatcatc
tgcctggcaaccgtggcgctgacgacggcctttaccgcctggatcatggaaactgtgatc
aacgaggccttcgccaacaagcgcgccgacctggtctggatcatctgcgtctcgatcttc
atcgctttctcgctgcgtggccttgccagctatggccaggcggtggctttgtccaagatc
ggcaataatattgttgcgcgctatcagaagcggttgttcagccatctgatgacgctgtcc
atgggctatttcaacgaggcccgctcggcgcatctggccgcccaggtcagccagaatgtc
aatggtatcagagatgttttgaacctgaccgtcacctcgacagcacgggatctgctcagc
ctcatcggcttgatcgccgtcatgctcgccaaggactgggtgctgacgctgattgttttc
gtggtggcgccgccggttctctattcgctgcgctatatttccaagcggctgcgcaaggcg
acgacggattccgtcatgctcaacagccgggtgctcggcgccatgcaggaaagcgtccaa
ggcattgccgtcgtcaaggccttcaccatggaagaagagcttggccgcaaggtggagggc
attatcgacagcgccgaaagccgcgccaatcgcattgcccgcctgagcgaacgcacgtcg
ccgattaccgaaagctttgccggtctcgccattgccgccgtcattgcctatgcctcctac
cgcaccatcgcgggtgggatgttgccgggcgccttcttctccttcatcgccgccctgctg
atggcctatgagcctgccaagcggctggcgaaattgcagatccagatggaacgggccgtg
gtcaatgcccggatgatctatgccatcctcgacacccagccgcaccagcgcgacaagccg
ggcgctggcgaattgaaggtcaccgaagcccgtatcgaattcaaagacattcatttcgcc
tatggcaacggccctgaaattctgaagggcgtggatatcacggccgaaggcggcaagacc
acggcactggtcgggccatcgggggccggaaaatccacgatcatcacgctgatcccgcgc
ttctacgatccgccgcagggccagatcctgatcgacggacaggacattgccgatgtgacc
aaggcctcgctgcgcaagcatatcgcctatgtatcgcagcatccctatctgttcgaaggc
acgatccgtgacaatatccgctatggtcgtccggaggccaccgatgccgacgtggaagaa
gccgcacgccttgcccatgcgcatgattttatcctcgctcagccctatggctatgaaaca
ccggtgggtgaaaacggcctgacgctgtccggtggccagcgccagcgcctgtcgattgcc
cgcgctctggtgcgcaacgcgccgatcctgcttctggacgaagccacgtccgctctcgac
accgaatcggaagccgccgtgcagaaggcgttggacgaggccatgaacggccggaccgtc
gtggttatcgcgcacaggctttccaccgtagtcaaggccgacaagatcgtggtgatgcag
gatggccgcgtggtcgaagtgggcaaccacaggacactgacggaaaggccggaagggctg
tacgcccggctgaacaacatgcaggcaaccaatggaagtccttcactgtaa
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