Agrobacterium vitis VAR03-1: RvVAR031_05900
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Entry
RvVAR031_05900 CDS
T08810
Name
(GenBank) phosphonate metabolism transcriptional regulator PhnF
KO
K02043
GntR family transcriptional regulator, phosphonate transport system regulatory protein
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avf03000
]
RvVAR031_05900
Transcription factors [BR:
avf03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RvVAR031_05900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_11
HTH_Crp_2
Rrf2
PaaX
TrmB
DUF5817_CT
HTH_36
Motif
Other DBs
NCBI-ProteinID:
BCH52980
LinkDB
All DBs
Position
1:complement(661504..662256)
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AA seq
250 aa
AA seq
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MTVKKVAGQKAIERQTGVALWRQIADRIRVSISDGTYDTTGMVPPETILASEFGVNRHTV
RSALAALAQEGIVRAVQGRGTLIERRDRISFPISKRTRFTPGIGGQARALEGLLLESAVE
TPSADLMDHLQLADGVQVIRLEVLRKADGRAVSRSTIWFPLPRFEGIDVAYRQSGSITAA
FAACGLADYLRVRTDISAVHADPSDRDELGLSPGAIVMITKALNTDLDGVPVQYAVTRFP
ADRVQFTIES
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgaagaaagtggcggggcaaaaagcaatcgaaagacagaccggcgtggcgctc
tggcgccagattgccgatcgaatccgggtatcgatcagtgatggcacctatgacacgacg
ggcatggtgccgccggaaacgattctggctagcgaatttggtgtcaacagacatacggtg
cgcagtgcgctggcggcccttgcccaggaggggatcgtgcgcgcggttcagggacgcggc
acactgatcgagcgacgggatcggatcagttttccgatttcaaaacgcacccgtttcacg
cccggcatcggcggtcaggcgcgggcgttggaaggtctgttgctggaaagcgccgtcgag
acacccagcgcggacctgatggaccatttgcaattggcagacggcgttcaggtgattcgg
ctggaagtgctgcgcaaagcggatggccgggcggtgtcacgctccaccatttggtttccc
ctgccccgtttcgaagggatcgatgtggcatatcggcagagcggctcaatcaccgccgcg
ttcgcggcctgtggccttgccgattatctgcgcgtgcgcaccgacatcagtgccgtccat
gccgatccttccgaccgggatgaactcggcctgtcacccggtgccatcgtgatgatcacc
aaagccctgaacacagatttggacggcgtgccggtgcaatatgccgtgacgcgctttccc
gccgacagggtgcagttcacgattgagagttga
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