Agrobacterium vitis VAR03-1: RvVAR031_06530
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Entry
RvVAR031_06530 CDS
T08810
Symbol
pyrF_1
Name
(GenBank) orotidine 5'-phosphate decarboxylase
KO
K01591
orotidine-5'-phosphate decarboxylase [EC:
4.1.1.23
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00240
Pyrimidine metabolism
avf01100
Metabolic pathways
avf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RvVAR031_06530 (pyrF_1)
Enzymes [BR:
avf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.23 orotidine-5'-phosphate decarboxylase
RvVAR031_06530 (pyrF_1)
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GFIT
Motif
Pfam:
OMPdecase
Motif
Other DBs
NCBI-ProteinID:
BCH53043
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All DBs
Position
1:complement(729226..729921)
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AA seq
231 aa
AA seq
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MDARNRLIVGLDVATVADAEKLVSTLAEDVTFYKIGYQLAFAGGLEFAKDLAQSGKKVFL
DMKLLDIDNTVASAVENIVRMGMTMLTLHAYPKAMQAAVEAAQGSGLCLLGVTVLTSMDD
HDLIDAGYQGDARSLVLKRAAQAKEKGMGGIVCSAQEAEAVRAILGPDMALVTPGIRPIG
ADAGDQKRVMTPADAIHAGSSHLVVGRPIVKADDPRAATQVILAEMQAAFT
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcgcaatcgtttgatcgtggggcttgacgttgccaccgtcgctgacgcggaa
aaactggtctcgacgctggccgaagacgtgaccttctacaagatcggctatcaactggcc
ttcgcaggcgggctggaatttgccaaggacctcgcccagagcggcaagaaggtcttcctg
gatatgaaactgctcgatatcgacaataccgtcgcctcggcggtggaaaatatcgtccgg
atgggcatgaccatgctgacgctgcatgcctatccgaaagcgatgcaggcagccgtcgag
gcggcgcaggggtcgggcctctgcctgctcggcgtaaccgtcttaacctcgatggatgac
cacgatctcattgacgccggttatcagggcgatgctcggtcgctggttttgaagcgggcc
gcccaggcaaaagaaaaaggcatgggcggcattgtctgctcggcacaggaagctgaggcg
gtgcgcgccattctcggtcccgatatggcccttgtcacacccggcatacgtcccatcggc
gcagatgccggtgaccagaagcgagtgatgacgccagcagacgccatccatgctggctcc
agccacctggttgtcggtcgcccgatcgttaaggcagacgatccgagagccgcaacccag
gtcattctcgccgaaatgcaggccgctttcacctga
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