Agrobacterium vitis VAR03-1: RvVAR031_06570
Help
Entry
RvVAR031_06570 CDS
T08810
Symbol
rsmI
Name
(GenBank) ribosomal RNA small subunit methyltransferase I
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avf03009
]
RvVAR031_06570 (rsmI)
Enzymes [BR:
avf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
RvVAR031_06570 (rsmI)
Ribosome biogenesis [BR:
avf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RvVAR031_06570 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
DUF4350
Motif
Other DBs
NCBI-ProteinID:
BCH53047
LinkDB
All DBs
Position
1:732774..733694
Genome browser
AA seq
306 aa
AA seq
DB search
MSAVAETVNTPDDGQKSFRLHDRPVTARPIEPALYLVATPIGNLSDITLRALEVLAGADV
LACEDTRVTRVLLDRYGITTRPYAYHEYNAEEVGPKLIEALSSGKSVALVSDAGTPLVSD
PGYRLAKLAIEAGLRVVPLPGPSAPLAALVGSGLPNDAFLFAGFLPTKDKARRDRLAQWA
ATPATLIFFESPHRIGATLAAAHEVLGADRSACVCRELTKTFEEFRRGTLAELSDWYDDE
RQVKGEIVLVVGPPLPSGPPDAADVDRLLVQLAQTLPTAGAATEAARQTGLPRKDLYQRL
LELKAE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgtggcagagactgtgaacacgccggatgacgggcagaaaagtttccggctg
catgatcgtccggtcacggcccggccaatcgagccggcgctctatctggtggcaaccccg
atcggcaatctctccgacatcacccttcgggctctggaagtgctggccggggccgatgtt
ctcgcctgcgaggatacccgcgtcacccgtgtccttctggaccgctatggcatcaccacc
cgcccttacgcctatcacgaatataatgccgaagaggtcggaccgaagctgatcgaggcg
ctgtcgtccggtaaatccgtggcgctggtttccgatgcggggacgccgctggtgtccgat
ccggggtatcggctggcaaagcttgccattgaggccgggctgcgggtcgtgccgttgccg
gggccatcagcgccgcttgcagccctggtcggctccggcctgcccaatgatgccttcctg
tttgcgggtttcctgcccaccaaggacaaggcgcgccgcgaccggctggcgcaatgggcg
gccacaccggccacgttgattttctttgaatcgccgcatcggatcggcgcgacccttgcc
gcggctcacgaggtattgggcgcggaccgcagcgcctgcgtctgccgcgaactgaccaag
acatttgaggaattccggcgcggcactctggcggaattatccgattggtatgatgacgag
cgccaggtcaagggtgagatcgtgctggtggtcgggccgccgctgccttccggtcccccg
gatgcagccgatgtcgaccggttgctggtgcaactcgcccaaaccctgcccacggcaggc
gcggcgaccgaagccgcccgccagaccggcctgccgcgcaaggatctctatcagcgcctg
ctggagttgaaggccgagtga
DBGET
integrated database retrieval system
