Agrobacterium vitis VAR03-1: RvVAR031_07780
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Entry
RvVAR031_07780 CDS
T08810
Name
(GenBank) C4-dicarboxylate ABC transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_07780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_07780
Transporters [BR:
avf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RvVAR031_07780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
BCH53168
LinkDB
All DBs
Position
1:complement(856107..857102)
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AA seq
331 aa
AA seq
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MFTLNKSSRLPAIMLGTVLGLSSLWSSTANAETTLRLAHASAPESLINEAVQKFATEVGE
NTKGSVKVQIFPNAQLGDEGPIADGVGAGSIDIGLGGAVDAIDPRLNVLSLPFLFRDASN
VHAFLDGEQGQKIQRLGEERGYVMLGVLDSGFRQFATSKPIEKPADLAGVKIRTPPNPVI
LATMKQLGALAESIPFGQVYTALQSHVVAAVEPEMRDYWDSKWYEVAKDLSISNYIWTAN
WWYMNKDKLDSLTPDEQAAVKKAATDTVVWYRSALDKAYADTQKKLEGKGVKVTKVDTAP
FVALVSPVYDQFSKEWGSDLVSAVKQAASAN
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgttcactctcaacaaaagcagccggctgcctgccatcatgctcggcaccgtacttggt
ctttccagcctttggtccagcaccgccaatgctgaaacaacattgcggctggcgcatgct
tcggcacctgaaagcctgatcaatgaagcagttcaaaaattcgcaacggaagttggtgag
aataccaagggatcggtgaaggttcagatcttcccgaatgcccagcttggcgacgaaggc
ccgattgccgatggcgtcggtgcaggttcaatcgacatcggtcttggcggtgcggtcgac
gccatcgatccgcgtctcaacgtgctatcattgccgtttctgttcagggacgcatcgaac
gttcacgcatttctcgatggcgaacaaggccagaagatccaacgcctcggcgaggaacgc
ggctatgtgatgctcggcgtgctcgactccggctttcgccagttcgccaccagcaagccc
attgaaaagccagcggatctggccggcgtaaaaattcgcacgcctcccaatcccgttatt
ctcgccaccatgaagcagcttggcgccttggcggaatccattcctttcggccaagtctat
accgcgctgcaatcgcatgtcgttgccgccgtcgagcctgaaatgcgcgattactgggac
tcaaaatggtatgaagtcgccaaggacctgtcgatctccaattatatctggaccgccaac
tggtggtatatgaacaaggacaagctggattcgctgacgcctgacgaacaggccgccgtg
aagaaagccgcgacagacaccgtcgtctggtatcgcagcgccttggacaaggcctatgcc
gacacccagaagaagctcgagggcaagggcgtgaaggtgacgaaagtggataccgcaccg
tttgtcgcgctggtctcgccggtctacgaccaattctcgaaagaatggggcagtgatctc
gtttcggcggtaaaacaagccgcaagcgcgaactga
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