Agrobacterium vitis VAR03-1: RvVAR031_07980
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Entry
RvVAR031_07980 CDS
T08810
Name
(GenBank) glycogen operon protein GlgX homolog
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00500
Starch and sucrose metabolism
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
Module
avf_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RvVAR031_07980
Enzymes [BR:
avf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RvVAR031_07980
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GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Glyco_hydro_70
pulA_all-beta
Motif
Other DBs
NCBI-ProteinID:
BCH53188
UniProt:
A0A6S6MSX2
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Position
1:complement(879623..881710)
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AA seq
695 aa
AA seq
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MDIQTSNFKILPGEWQRLGARYTGEGVNFALFSAHADRVELCLYDPSGSIEIARMDLPDY
TNEIWHGFVPGLKPGALYGFRVHGPFEPENGHRFNHNKLLLDPYARELVGDIRWSPEVFG
YHFDDPDKDLSFNDLDSAAFMPKCRVVDPNQVDWGNDRRPQVSWADTIVYETHVKGFTQL
NPAIPQELRGTFEGLGHKAAVDYIKSLGITSVELLPIHAFPDDGPLLDKGLKNYWGYNTI
GFFAPAHRYYGANGIQGFRDMVRAFHDGGIEVILDVVYNHTAEGNELGSTLSFKGIDNFS
YYRTLPDNHRYYINDTGTGNTVNTSHPRVLQMVMDSLRYWADDMHVDGFRFDLGTILGRE
PEGFDERGGFFDAVTQDPTLAGVKLIGEPWDIGPGGYQVGGFPPGWAEWNDKYRDSCREY
WLNGDNCAPDFAARLLGSGDLYDQRGRRPWASVNFITAHDGFTLNDLVSYDGKHNEDNGE
DNNDGHNDNRSHNYGHEGPTDDEGTNAVRERQKRNFLATLLFSHGTPMLLAGDEFGRSQM
GNNNGYCQDSEISWLHWENLPDSADALRDFTKRVILLRKEQPLLRRENWRDGMMIDWYSV
SGGRQTSENWENSNALITRLHREDLQVEEGIWSDIMMLFNPLDEDTIFTIPKESGGERVL
ELITGDPERQGEKVKQGETFKLLPRSMALLRTIQT
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggacatccaaacgagtaacttcaaaattcttcccggcgagtggcaacggctgggtgcc
cgctacactggcgaaggggttaatttcgccctgttttccgcccatgctgatcgcgtcgag
ctatgtctctatgatccaagcggcagcatcgagatcgcccggatggatctgcctgattac
accaatgagatctggcatggatttgtgccagggctgaagcccggagcgctctatggtttc
cgcgtccatgggccttttgagcctgaaaacggccatcgcttcaatcataacaagctgctg
ctcgatccctatgcccgcgaactggtgggcgatatccgttggtcgcccgaagtgttcggc
tatcatttcgacgatcccgacaaggacctttccttcaacgatctcgacagtgcagctttc
atgccaaaatgccgggtcgtggatcccaatcaggtcgattggggcaatgatcgccgccct
caggtctcctgggccgatacgattgtctatgaaacccatgtcaagggcttcacacagctc
aatcccgccattccgcaggaactgcgcggcacattcgaaggcctcggtcacaaggcggcg
gttgattatatcaagagccttggcattacctctgtcgaactgctccccatccacgccttc
ccggatgacggcccgttgctggacaagggcctgaagaattactggggttataacaccatc
ggcttttttgcccctgcgcaccgttattacggcgcaaacggcatccagggcttccgcgac
atggttcgcgccttccatgatggtggcatcgaggtcattctcgacgtggtctacaatcac
acggcggaaggcaatgaacttggctcgaccctgtccttcaagggcatcgacaacttttcc
tactaccgcaccctaccggacaatcaccgctattacatcaacgataccggcaccggcaac
acggtgaacacctctcatcctcgcgtcctccagatggtgatggactcgctgcgctactgg
gccgatgacatgcatgtcgacggtttccgcttcgatctcggcaccatcctgggccgcgag
cctgagggcttcgatgagcgcggcggcttttttgacgcggttacccaggacccgacactt
gctggcgtcaagctgatcggcgagccctgggacatcggtccagggggttatcaggttggc
ggctttccgccgggctgggcggaatggaacgacaaataccgcgacagttgccgcgagtat
tggctgaacggtgacaattgcgctccggatttcgcggcgcgtctgctgggctccggcgat
ctctacgaccagcgcggccgccgtccctgggccagcgtcaatttcatcaccgcccatgat
ggcttcacgctgaacgacctcgtttcctatgatggcaagcacaacgaagacaatggcgag
gataataacgacggtcacaacgacaatcgcagccataattatggccacgaaggcccgacc
gatgacgaaggcaccaatgcagtgcgcgagcgtcaaaagcgcaatttcctggccactctg
ctgttttcgcacggcacgccaatgctgctggccggtgatgaattcggtcgttcgcagatg
ggcaataacaacggctattgccaggatagcgaaatcagctggctgcattgggaaaatctg
cccgacagcgccgatgccctgcgtgatttcactaagcgggtcatcttacttcgcaaggag
cagccattgctacggcgggagaactggcgcgatggcatgatgatcgattggtacagcgtg
agcggcggccgccaaacctcggaaaactgggaaaacagcaatgcgctgatcacccgcctt
caccgcgaagacctccaagtcgaagaaggcatctggtcggatatcatgatgctgttcaat
ccgctcgatgaagacaccatcttcaccattcccaaggaaagcggcggagaacgggtgctc
gaactgatcaccggcgatccggagcgtcagggcgagaaggtcaagcaaggcgaaacattc
aaactgctgccgcgcagcatggcgcttttgcggacgattcaaacctga
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