Agrobacterium vitis VAR03-1: RvVAR031_08260
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Entry
RvVAR031_08260 CDS
T08810
Name
(GenBank) hypothetical protein
Organism
avf
Agrobacterium vitis VAR03-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3060
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
BCH53216
LinkDB
All DBs
Position
1:complement(910313..917338)
Genome browser
AA seq
2341 aa
AA seq
DB search
MLDLNGNGIQITALNASDKYFDMAGDGKQHRTAWAGAGDGVLVLDLNGSGKITQQDQVQF
TAWDPTATSDMQALRDVFDTNHNGKLDAGDADWNDFKVMVTNADGSTTLKTLTQLGITSI
DLTSNHQDIVLPDGSAISGETTFTKSDGSTGTAADAVFSYDPDGYLVKQTRAKNTDGTST
LDSKSFNANGTLASETLSTYSADGNTVTRKFDDNGDGVFNRTQTDTKTTNSDGSLTETIR
NYDSSGTRLTSELQLVTAPDGKTRTILRDTNGWGFFDEVETVTFGSDGSETTMASDMNAD
GSLRDRTIVTTSADGLSKTAQLEKTGNGQIDSTQTDTITVASDGTRTETVIQYAGTGTAQ
TNTIGTSTTVTSANGDSKTTSTDLDGNGSTDLVSTSSIVFNADGSTTTTQSELNGDGTLR
DRTETDLSANGINKTTKVDIDGDGVFDTVTTETVVQNSDGSGSDTTATNNANGSLRQEQV
SSWSADGKTKTAETDRDGDGHFDRIDVTTIGSDGSSTETVSNYSPNGSVLVSKTLTVTSA
DGLTKTSQIDINGDGSFDSAQSTSTVHNSDGSSTVTVIAKSGANAVETGRTVTTTSANGH
SVTIQKFLDGQSTADYATTDVKATNADGSSTETVTTLIGTSQVQVSRTVTVVSEDKRTTT
VSTTTDNNQSPTAVTETDIHADGSETQTASNYSPDGSVLLSRTVTTTSADGLSVTATRDA
NGDGIIDATSVSQTVLETDGSTVTTVTRDYGSGTAAANEVGKTQTTSSANGLSVITRTDY
DGNGSFDSETVDSKTLNADGSTTETLSTYNGDGSRLLGRTQTVTSANGLSVTTSSDVDGD
GTFDAITTDGIVLNANGSKTETKTVSDANHTLVSKSVSTTNSAGTAGSSSTYLNGSSTAY
QSQTLSVNADGSSTSVKSTYDPNGVATSSFSKTISADGLSQSSTLTVSGDQTASRSSSSV
EILNADGSTAQSFSDFGSGGALIDKTSDQTSADGLSTVTQWDNNGDGTVDYSASNTTVLN
ADGSTTVTSSSYNGDTSLHNRTVTVTSADKNSVTTTRDVNGDGAVDQTVQSLRNGGGSTT
VAAMDGTVETASGRAFGSQDGRYETDSADGLTRTVLYDANGDGLAETGQVSTTTVNSDGS
HITTILDETFSGGDASSANPSYSATVSDRTQINSSANGLDSVTKWDLDGSGDYAESKADV
KSIGSDGSTTETISMVDNGVLTSRKSTTVSGNGLTTTTSWDATGSGTAAQQSTSSKVVEA
DGSTVLTTNSVALPGLDLSASIVTTQADGLGVITDIDEDGDGVFEKIMNRTVTMLADGSS
SVVVSDSNSAGVLLDKTTTQTSLNGRHMVISTDADGNGSVDQVVDSLQAVDGGTQTVKTN
YNADGSTGSRVVSTTTADGLVMTTSQDLDGDGLADRKIVDTTASNADGSSRLLEQTYATS
GTTASGATSAITPVLIKTVQRSESADGRTTVTTTDVNGDGSVDKVVTDVTHADGSKTTTT
TANAVAQRYQSHLGTVLWHSAFAAQDQKVAASSIQTTDSTGMSSNVLSDYDGDGIHDHQE
SWARNIDGSQIATISDMDADGWIAARGLETITADGLTTILYEDSSNSGMIDHIDKAVMRA
DGSEVETISDLNGDGSVAGSTTTTISATGQTSTSQPTFQPATTQTVSDDNSSRSFSGSDD
AIDVEGQSNQIILGNGINQVALVGDDNTIHETGDTVATIAAYGANERLEVSGRNNIATIS
NASVVIDNGGGLILSGGNDSVVLHGNSAVRIWSGDGNTVEISGYGTGLDASGTTISIDDG
ATVLVSGDDDQVVAHNGSVLVDTDRTVSGDELDVIGQGVNAAISGWTISVGENASGTVTG
DDNAIALFGNAVFSIASGADNTVAAFGTNNTVMASNASVVVETGSSLTLVGSGLTIDEYT
DASLTLSGSGSTISIDGRGTTATASNATIIMTGSADAVVTGGGDTLNVSGNSNNATLSGG
TVHVGTATQAASLSLAGDGDDIMLAGNGSSLDASGSGGRLDIQGDATVASISVATIQIDG
DFSTIYGENNTITINRADASVAVWGDHNRINGNASGDTVTIVGTDETAALSHASVTIGTD
SAVTMTGDDLAIEADIRASLTLSGNDNVISIGGRGTSITTSNATLVMSGSADVTVTGSGD
VLNVSGSSNNAVLSVGTINIAEGAEVMVDGNNNSVVLNSGSDMDTADGSGLHDTVEVKGA
GALTAVDQSSVTLDAGASLSLTGEQDTITMGQDTALEIFGANDNFVFHAGFGQDVISGYQ
ASGSSADMIAFDHTTFSDWTDLLSNAQQSGQDVIITSHTNDTLTLTNTSLSNLQQSKFSF
S
NT seq
7026 nt
NT seq
+upstream
nt +downstream
nt
gtgttggacctgaacggcaatggcatccagatcaccgcgttgaacgcgtcggacaagtat
ttcgacatggcgggcgatggcaaacagcacagaaccgcttgggcgggtgcgggcgatggc
gtgctggttctcgacctcaacggatcgggaaaaatcacgcagcaagatcaggtacagttc
acagcctgggaccccactgcgacgtcagacatgcaggctctcagggatgtcttcgataca
aatcataacgggaagctcgacgccggtgacgccgattggaacgacttcaaggtgatggtg
accaatgccgacggttcgaccaccttgaagacgctgacgcagctcggtattacatcgatt
gatcttacgagcaatcaccaggacatagtcttgccagacggctcggcgatatctggcgaa
accacgttcacgaagagtgatggctcgacgggcactgctgccgacgcggttttctcctat
gatcctgatggttatctggtcaagcagacacgggcaaagaataccgatggcacatcaacc
cttgacagcaagtccttcaatgcaaatggcacactggccagcgaaacgctgtctacctac
agtgccgatgggaatacggtaacccggaaattcgacgataatggcgacggcgttttcaat
cgcacccagacggatacgaaaaccaccaattccgatggatcgctgacggaaaccatccgc
aactatgatagcagcggcaccaggttgacgagtgagcttcagctcgtcactgcgcccgat
ggcaagacgcgcacgattttgcgcgacacgaatggatggggcttcttcgacgaggtggaa
accgtcacgttcggctcggatggctctgagacgacgatggccagtgacatgaatgccgat
ggttcgcttcgggaccgtaccatcgtcaccacgagtgccgatggcctgagcaagacagct
cagctggaaaagaccggcaacggccagatcgattccacccagaccgacaccatcactgtt
gcctcggacggaacgcgaacggagaccgtcattcagtacgctggtaccggcacggcgcaa
acgaacacaatcgggacgtccacgaccgtcaccagcgccaatggtgacagcaagaccacc
agcacagatctcgatggcaacggttctaccgatctcgtttccacgagttctattgtcttc
aatgctgatggcagcacgacgacgacacagagcgagttgaatggcgatggcactctccgc
gatcgcacggagacggatctcagcgccaatggcatcaataagaccaccaaggtcgatatt
gatggcgacggtgtctttgatacagtcacgacagagaccgttgtgcagaatagtgacggg
tcaggctccgatacgaccgcaacgaacaacgccaacggcagcttgcgtcaggaacaagtg
tcatcctggagcgccgatggtaagacgaagacggcagaaaccgatcgggacggcgacggt
catttcgaccggattgatgtgacaacgattgggagcgatggcagttcgaccgagacggtc
tcgaattacagtcccaatggatcggttctcgtttcgaagacactcacggtcacgagcgct
gatggcctgaccaaaaccagccagatcgatatcaacggagacggcagcttcgactcagcg
caatcgacttcgaccgtgcataacagtgatggttcctcgacagtaacggttatcgccaaa
agtggtgccaatgctgtggaaacgggcagaacggtcacgacgaccagcgccaatggccat
tccgttaccatacaaaagtttctcgatggtcagtcaacagccgattatgcaacaacggat
gtgaaggcgacaaacgccgatggatcctccacggagactgtgacgacgttgatcggcaca
agccaggttcaggtcagtcgtactgtcaccgtcgtcagcgaggacaagcggacgacgacg
gtttcgaccaccaccgacaacaaccagtcaccgacggccgtaactgagacagacatccat
gccgatggctccgaaactcagacggcctcgaattacagccctgacggctctgtgcttcta
tcgcgtactgtgacgacgaccagtgctgacggcctgagcgtcacagccacacgcgatgcc
aatggcgacggtattatcgatgcgacctccgtttcgcagactgtgctcgaaaccgacggt
tctacggtgacaaccgtaacccgtgattacggctccggcacggctgccgcaaatgaggtg
ggtaagacgcagaccacaagcagtgccaatggtttgtcggtaatcacccgaaccgattat
gatggtaatggtagcttcgacagcgagaccgtggattcaaagacgctcaacgcagatggc
tccacgacagaaaccctttccacctataacggcgatggttcacgtcttctaggccggacg
caaactgtaaccagcgctaatggcttgagcgttaccaccagcagtgacgtcgatggagat
gggacgtttgatgccataaccacagacggaatcgttctcaacgcaaatggttctaaaacg
gaaaccaagactgtttccgacgcaaatcataccctggtctcaaaatccgtttctacgaca
aattctgctgggaccgcaggttcatccagcacgtatctgaatggcagttccactgcatat
caaagccagacgctaagcgttaatgccgatggctcaagcacatctgtaaagtcgacctac
gacccaaatggcgttgccacatcttctttcagcaaaaccatcagcgccgatggactcagt
caatcgagcacgctgaccgttagcggtgatcaaacagccagccgctcgagctcgtcggtc
gaaatcctgaatgccgatggctctacagcgcagtctttctctgatttcggatcaggaggg
gcacttatcgacaaaacgagcgatcagaccagcgccgatggcctttcgaccgtcactcag
tgggataacaacggtgatggcaccgtcgattactcggcatcaaacaccactgtcctcaat
gcggatggctccacgactgttacgagcagcagctacaacggcgatacctcgttgcacaac
cggacggttacggtcacaagcgccgataagaacagcgtaacgacgacacgtgatgtcaac
ggcgatggcgcggtcgatcaaaccgttcaaagtctcaggaatggaggcggatctacaacg
gtcgcagcgatggatggcacggttgagacagcctcaggccgggcattcgggtcgcaggat
ggccgttatgaaacagatagcgcggacgggctgacaagaaccgtcctctacgatgcaaat
ggcgatggattggcggagaccggtcaagtctcgaccacaacagtcaattccgacggcagt
cacatcacgacgatactcgacgaaacgttctcaggcggtgatgccagttcggcaaatcca
agctacagcgccaccgtcagcgatcggacccagatcaactccagcgccaatggtctggat
agcgtgacaaagtgggatctcgatggttccggagattatgccgagagcaaagccgatgtg
aagagcattggcagtgatggctcgacaaccgaaaccatcagcatggtcgacaatggtgtc
ctgaccagccggaaatcaaccaccgtcagcggcaatggcctgaccaccacgacctcctgg
gatgcaaccggctctggaaccgctgcgcagcaatccacctcaagcaaggtggtcgaagcc
gatggctcgacggtgctgacgacgaattccgtggctctgcccggactggacctgtcggcg
tccatcgtcaccacccaggcggatggtctcggtgtcatcactgatatcgatgaggatggc
gatggtgtctttgagaagatcatgaaccggactgtaacgatgcttgccgacggctcaagc
tctgtcgtggtgtccgacagcaattccgcaggcgttcttcttgacaagacgacgacccag
accagcctgaacgggcggcatatggtcatcagcacagatgccgatggcaatggttcggtc
gatcaggtggtcgatagcctgcaggccgtagacggcggcacacagacggtgaagaccaac
tacaatgccgatggttccacgggcagtcgggtcgtctccacgacgacagccgatggactg
gtgatgacgaccagccaggatctggacggcgacgggcttgcggatcggaagatcgtcgac
accacggccagcaatgccgatggctcaagcaggctgctggagcagacctatgcaacgagc
ggcacgacggcatcgggtgccacatcggcgatcacgcccgtgctgatcaagaccgttcag
cgcagcgagagtgcggacggaaggacaacggtcaccacgaccgacgtcaatggtgatggc
agtgtcgacaaggttgtgacggacgtgacgcatgccgacgggtcgaagaccacgaccacc
accgccaatgcagtggcgcaacgctatcaaagccatctcggcactgtgctctggcattcc
gcctttgccgctcaagaccagaaggtcgcagccagcagcatccagaccaccgactccacg
ggcatgagcagcaatgtgttgtctgactatgacggcgatggcatccacgatcatcaggaa
agctgggcgaggaacatcgacggatcgcagattgccacgatcagcgacatggatgccgat
ggctggatcgctgcgcgcggcctggaaaccatcactgccgatggtctgacgacgatcctc
tatgaagatagcagcaatagcggcatgatcgaccacatcgacaaggccgtcatgcgggcg
gatggaagcgaagtcgaaaccatcagcgatctcaatggcgatggttccgtggcgggatcg
accaccaccaccatcagcgccaccggccagaccagcacaagccagcccacatttcagcca
gcgaccacgcaaaccgtgtcggacgacaacagcagccgcagcttttccggaagcgacgat
gccatcgacgtcgaaggtcagtccaaccagatcatccttggtaatggcatcaatcaggtg
gccctcgtcggggacgataataccattcatgaaaccggagatacggtcgccactattgca
gcctatggggccaatgaacgcctggaggtcagcggacgcaataatatcgccacgatttcc
aatgcgtctgttgtcatcgataatggtggcgggctgatcctttcgggaggaaacgacagc
gttgtcctgcacggtaacagcgcggttcggatctggagcggcgatggcaatacggtggaa
atctccggctacggcacggggctcgacgcttccggtacgacaatctccatcgatgatggg
gcaacggtcctcgtcagcggtgatgacgatcaggtcgtagcccataacggttcggttctt
gtcgataccgaccgaacggtgagtggtgatgagctcgatgttatcggccaaggggtcaat
gcggcgatttccggctggaccatttccgtgggcgagaatgcgtcgggaacggtgacggga
gatgataacgccatcgctctctttggaaacgccgtgttttccattgccagcggcgccgat
aatactgtcgcagccttcggtacaaacaatacggtgatggcctcgaatgccagcgttgtc
gtggaaaccggcagcagcctgacactggtcggtagtggtttgacgatcgatgaatatacc
gatgcaagcctgaccctttcgggcagcgggagcaccatctccatcgacggacggggcacg
accgccacggcctcgaatgcaacgatcatcatgacgggttcggcggatgccgttgtcacc
gggggtggcgatacgctgaatgtctctggcaatagcaacaatgccacgctttcgggcggc
accgttcatgtcgggacggcaacgcaagcagccagcctatccctggccggagatggcgat
gacatcatgcttgccgggaatggttcctcgctcgatgccagcggttctggcggcaggctg
gatattcagggagatgcgacagtcgcctcgatctcggtggctaccattcagatcgatggt
gatttttccaccatctacggtgagaataatacgatcacgatcaaccgcgctgatgcgtcc
gtcgcggtttggggcgatcacaaccgcatcaacggcaatgcgagcggtgacaccgtgacc
attgtggggacggatgaaacagccgcgttgtcccatgcaagcgtcaccatcggcacggac
tccgccgtcacgatgacgggcgacgatctggccatcgaggcggacattcgggcaagtctg
accctttcgggcaacgacaacgtgatctcaatcggagggcgcggcaccagcatcaccacc
tcgaatgcaacgctggtcatgagcggctctgccgatgtcacggtcacaggaagcggcgac
gttctaaatgtgagcggcagcagcaacaatgctgttctatcggtcggaaccatcaatatc
gccgagggcgcggaggtgatggtcgacggcaataacaatagcgtggttctgaattccggc
agcgatatggacaccgccgatggcagcgggctgcacgacactgtcgaggtcaagggcgcc
ggtgccttgacagcggtggatcaatcgagcgtgacgctagatgccggagcctcgctctcc
ctgaccggtgagcaggatacgatcaccatgggccaagatacggcgctcgaaatcttcggg
gccaatgataacttcgtcttccatgcaggcttcggccaggatgtaatatcgggttatcag
gcatccggcagcagcgccgatatgattgcttttgatcacacgactttctcggattggaca
gatcttctctctaacgctcagcagtccggacaagatgtgatcattacatctcacaccaat
gacacactgacgctaacgaatacttcactttcaaaccttcagcagagcaagttcagcttc
tcctga
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integrated database retrieval system
