KEGG   Agrobacterium vitis VAR03-1: RvVAR031_08870
Entry
RvVAR031_08870    CDS       T08810                                 
Symbol
rkpS
Name
(GenBank) ATP-binding protein
  KO
K09689  capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
Organism
avf  Agrobacterium vitis VAR03-1
Pathway
avf02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:avf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    RvVAR031_08870 (rkpS)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:avf02000]
    RvVAR031_08870 (rkpS)
Enzymes [BR:avf01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.12  ABC-type capsular-polysaccharide transporter
     RvVAR031_08870 (rkpS)
Transporters [BR:avf02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Capsular polysaccharide transporter
    RvVAR031_08870 (rkpS)
SSDB
Motif
Pfam: ABC_tran SMC_N MukB AAA_21 DUF87
Other DBs
NCBI-ProteinID: BCH53277
LinkDB
Position
1:complement(988860..989513)
AA seq 217 aa
MITLENVTKYYKTAAHRRFILRNQSMQFVAGRSYGLLGVNGAGKSTTMRLISGAELPNKG
RIHRQVRVSWPLGFANGLNHMLSGKENLKFVARAYGEDFHRVLRFVAEFAEIGSYLNEPL
RTYSSGMMARFAFGLSMAIDFDCYLVDEITAVGDSNFQRRCREAFMARRAKSDVIMISHD
MDTIKDYCDVALVLIDGHMVQFDSVEEGIATYMRLNR
NT seq 654 nt   +upstreamnt  +downstreamnt
atgatcacccttgagaacgtgacgaaatattacaagacagcggctcatcgccggtttatc
ctgcgcaatcagagcatgcagtttgtcgccgggcgttcctatgggctgcttggggtgaac
ggcgccgggaagtcgaccacgatgcggctgatctcgggcgcagaactgccaaacaagggg
cgcatccatcgacaggtacgggtgtcctggccgctcggtttcgccaatggtctgaaccac
atgttgagcggaaaggaaaacctgaaatttgtcgcaagggcctatggtgaagattttcac
cgggttctgcgctttgtcgcagaatttgccgaaattggcagttatctgaatgaaccgttg
cgcacctattcgtccgggatgatggcgcgttttgcattcggcctttccatggccatagat
ttcgattgttatcttgtcgatgaaatcaccgccgtcggagacagcaactttcaacgacgc
tgtcgggaagccttcatggcccggcgggcgaaatcagatgtcatcatgatttcccacgac
atggacacgattaaggattattgcgatgtcgctcttgttttaattgacggtcatatggtg
caattcgatagtgtcgaagagggtatcgccacatatatgcgactgaatcgctag

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