Agrobacterium vitis VAR03-1: RvVAR031_08910
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Entry
RvVAR031_08910 CDS
T08810
Name
(GenBank) glycosyl transferase family 1
Organism
avf
Agrobacterium vitis VAR03-1
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
MMR_HSR1
AAA_29
RsgA_GTPase
AAA_30
AAA_23
ATP-synt_ab
TsaE
ORC-CDC6-like
MeaB
nSTAND3
Dynamin_N
PduV-EutP
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
BCH53281
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Position
1:993501..995126
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AA seq
541 aa
AA seq
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MIRIENISKQNSHRLLFIEASAALNKGEKIGLVGTNGAGKTTLFRMITGEELPDEGQVST
EKGVTIGYFNQDVGEMSGRSAVAEVMDGAGPVSTVAAELRELEGAMSDPDRMDEMDAIIE
RYGEVQARYEELDGYALEGRAREVLDGLSFSQEMMDGDVGKLSGGWKMRVALARILLMRP
DVMLLDEPSNHLDLESLIWLESFLKNYDGALLMTSHDREFMNRIVTKIIEIDGGSLTSYS
GDYGFYEGQRAQNEKQQQAQFERQQAMLAKEIKFIERFKARASHAAQVQSRVKKLDKIDR
VEPPRRRQTVAFDFLPAPRSGDDVINIKNVHKAYGSRTIYQGLDFMVRRRERWCIMGING
AGKSTLLKLVAGTTEPDQGTVSIGASVKLGYFAQHAMDVLDGDSTVLQWLEESFPKAGQS
PLRALAGCFGFSGDDVEKRCRVLSGGEKARLVMAAMLFDPPNLLVLDEPTNHLDLDTKEM
LIKALSAYEGTMLFVSHDRHFLAALSNRVLELTPDGIHQYGGGYTEYVARTGQEAPGLHA
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtattgaaaatatctccaagcagaacagccatcgcctgttgttcattgaggcc
tccgccgccctgaacaagggggagaagattggcctggtcgggacgaatggtgctggcaag
acaacgctgtttcggatgatcactggcgaggaattgcccgatgaaggccaggtctccacc
gaaaaaggcgtcaccatcggctatttcaatcaggatgtcggcgaaatgtccgggcgttcg
gcggtcgccgaagtgatggacggggcagggcctgtcagcacggtggcggcagaactgcgg
gaattggaaggcgccatgtcggacccagaccggatggatgagatggatgcgatcatcgag
cgctacggcgaggtacaggcccgctacgaagagctggatggctatgcgctggagggccgg
gcgcgcgaggtgctggatgggctgagcttttcccaggagatgatggatggcgacgttggc
aagctgtcgggtggttggaagatgcgcgtggcactggcccgtattctgctgatgcggccc
gatgtgatgctgcttgacgaaccgagcaaccatctcgatctcgaaagcctgatctggctg
gaaagcttcctgaaaaattacgacggcgccctgctgatgacctcgcatgaccgcgaattc
atgaaccggatcgtcaccaagatcatcgagattgatggcggctcgctgaccagctattcc
ggcgactatggcttttacgagggccagcgcgcccagaatgaaaagcagcagcaggcgcaa
ttcgagcgtcagcaggcgatgctggcaaaggaaatcaagttcatcgagcgtttcaaggcg
cgcgcgtcccatgcggcacaggtgcagagccgggtgaaaaaacttgataagatcgatcgg
gttgagccgccgcgccgccgtcagacggtggcgtttgacttcctgcctgcgccacgctcc
ggcgatgatgtcatcaatatcaagaatgttcacaaggcctatggcagccggacgatttat
cagggtctggatttcatggttcgccggcgcgaacgctggtgcatcatgggcatcaatggc
gctggaaaatcgacgctgctgaagctggttgctggcacgaccgagccggatcaaggcacg
gtcagcattggtgccagcgttaagctcggctatttcgcccagcatgccatggatgtgctg
gatggagacagcactgtattgcaatggctggaggaaagctttccaaaggcagggcagtcg
ccgctcagggcattggccgggtgcttcggcttttccggcgacgatgtcgaaaagcgctgc
cgggtactgtcgggcggtgagaaggcccggttggtgatggcggccatgttgttcgaccca
ccaaatcttctcgttctggacgaaccgaccaaccatctggatctcgacaccaaggaaatg
ttgatcaaggcgctgtcggcctatgaaggcaccatgctgtttgtcagccatgaccggcat
tttctggctgccttgtccaaccgtgtcctggaactgaccccggatggcatccatcaatat
ggcggtggttataccgaatacgtggcgcgcaccggccaggaagcgcccggtctgcacgcc
gcataa
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