Agrobacterium vitis VAR03-1: RvVAR031_08930
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Entry
RvVAR031_08930 CDS
T08810
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_08930
Transporters [BR:
avf02000
]
Other transporters
Pores ion channels [TC:
1
]
RvVAR031_08930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BCH53283
LinkDB
All DBs
Position
1:996346..998472
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AA seq
708 aa
AA seq
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MIATLLLASVALSARAEDVSGQAGDTAGTTVLQTITVTGKKSTRGYQPLSTSTATRADTP
LLDVPQAVNVVSGEALKDQGARSLDDALANISGITQANTLGGTQDAVIRRGFGDNRDGSI
LTDGMKTALPFSFNATTDRVEVLKGPASTLYGILDPGGMVNVVTKKPEDVFSGEVYSSVT
GYGAGKYGSTSGLDVTGPIAGTDFSYRFIAEGQKSDYWRNFGETKKWMVAPSLSWSGEDT
EVTVSYMHDDYSVPFDRGTIFDLTTGHAVDLSRRTRLDEAYNITDGTSDLAKVSIDRQVS
DDWKLSLNYAYSRNEYSDNQARVTGYNSTTGAVTRRADATQYSTSYNHAARADLTGEVEI
GGLQNDLLFGVSYDYSDTLRTDMLRCANSSNFNINNPVYGNLAQCTKVSASDSDQTEQLS
TASVYMQDSLHLTDQWILVGGLRYQYYDLYAGKGRPFNANTDSNGDALIPNGGIVYKLTP
EISLYANAARTFRPQSSISSYYGNLDPEEGTSYEIGSKFELLEGLSANVALFSARKKNVA
YSETIGGESVVKTAGLVRSRGLEVDVAGQLTDHWQVIASYGYTDAKVLEDPDYAGKQLPN
VARHTGALSVAYDVGDIGGDGNRLKVGGGIRAVGKRAGINSNSYFLPGYAVVDLFAAYTF
NFERPLTLQVNLKNIFDKTYYTSSIGSTNYANQIGEPFNVTVRASVKF
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgatagcgacgctgttgctggcatccgttgctttgtcagccagggccgaagatgtctcc
ggccaggccggggatacggctggcacgacggtgcttcagaccattacagtgacgggcaaa
aaatcgacgcgcggttatcagcccctatcgaccagcaccgcaacccgcgcggatacgccg
ctgctggatgtgccgcaggcggtcaatgtggtgagcggtgaggctttgaaggatcagggc
gctcgctcgctggacgatgcgctcgccaatatcagcggcattacccaggccaatacattg
ggtggcacgcaggatgccgtcattcgccgcggctttggcgacaatcgcgacggttcgatc
ctgaccgatgggatgaaaaccgcgctgccattttccttcaacgccaccaccgatcgggtt
gaggtgctgaaaggcccggcctcgacgctttacggcattctcgatcccggcggcatggtc
aatgtcgtcaccaagaagccagaggacgtgttttccggcgaagtctatagcagtgtaacc
ggatatggtgctggcaaatatggatcgacctccggcctggatgtgaccggaccgattgcc
ggcaccgacttttcctatcgtttcatcgcggaaggccagaagagcgattactggcgcaat
ttcggtgagaccaagaaatggatggtcgcaccatccttgagctggagtggcgaggatacc
gaggttaccgtctcctatatgcacgacgattacagcgtgcccttcgaccgtggcacgatt
ttcgatctgaccaccggccatgcggtggacctcagccgccgcacccggctggacgaggca
tataacattaccgatggcacatcggatctggccaaggtgtcgattgaccggcaggtgagc
gacgactggaaactgtccctgaactacgcctatagccgcaacgaatattccgataaccag
gcccgcgtcaccggctataattccacaaccggtgccgtgacgcgccgcgccgatgccacg
caatattccaccagctataatcatgcagccagggccgacctgaccggcgaagtcgaaatc
ggcggtttgcagaacgacctgttgttcggcgtgtcctacgattacagcgatacgctgcgc
actgacatgctgcgttgcgccaattccagcaatttcaacatcaacaatccggtttacggc
aatctggcgcaatgcaccaaggtttcggcctccgacagcgaccagacggagcaattgtcg
accgcctcggtctatatgcaggacagcctgcacctgaccgaccaatggatattggtcggc
ggtctgcgctaccaatattacgatctctatgccggcaaggggcgccccttcaatgccaat
accgacagcaatggcgatgcgctcattcccaatggcggtatcgtctacaagctgacgcct
gaaatctcgctctacgccaatgcggcccggactttccggccccaatcgtcgatctccagc
tattatggcaatctcgacccggaggaggggacatcctacgagatcggcagcaaattcgag
ctgctggagggtttgagtgccaatgtcgcgctgttttccgcccgcaagaagaatgtcgcc
tattccgagacgattggtggcgaaagcgtggtcaagacagcggggctggtgcgctcgcgg
ggcctcgaggtcgatgtggccggccagttgacggatcattggcaggtaattgcgagctat
ggctataccgatgccaaggtgctggaggacccggattatgccggcaagcaattgcccaat
gttgcccgccataccggcgccttgtccgtggcctatgatgtcggtgacatcggcggcgat
gggaacaggctgaaggttggcggcggcatccgcgccgtgggcaagcgggcaggcatcaac
agcaatagttatttcctgcctggctatgcggtcgtcgatctgttcgccgcctacacattc
aacttcgagcgaccactgacgctccaggtgaatttgaagaatattttcgacaagacctat
tacacctcgtcgatcggctcgaccaattacgccaaccagatcggtgaacccttcaatgtc
acggtgagggccagcgtcaaattctaa
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