Agrobacterium vitis VAR03-1: RvVAR031_09530
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Entry
RvVAR031_09530 CDS
T08810
Name
(GenBank) methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02020
Two-component system
avf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_09530
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAR031_09530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
avf02035
]
RvVAR031_09530
Bacterial motility proteins [BR:
avf02035
]
Flagellar system
Chemotaxis proteins
MCPs
RvVAR031_09530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
HAMP_2
4HB_MCP_1
V_ATPase_I
Amnionless
MULE
YidB
RalF_SCD
DUF543
WXG100
FH2
Motif
Other DBs
NCBI-ProteinID:
BCH53343
LinkDB
All DBs
Position
1:complement(1053742..1055964)
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AA seq
740 aa
AA seq
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MLDNVKLSYKIYGGFGVIIAILITIAGMSVYSNTSNQSNFTDYRAIARLTNEAGRVQANM
LEARLAFLRYQADQSTDNLAAFDKRLATVKESTANLLSMARSDAEKSASAGFTAAVADYE
NGFKAVVAAQSERDKLVDESLDRLGPGIEKSTSQLLGDFDSSGNNIAAYKATQFLASTFV
MRLAATKYLLNNETKDYEAAMAAAQDALARSTEVTAAIVIPERTQRFKATLDDLNTYISD
LTKIQAVITKRNSVITNVMNTVGPKLAKDTEELKLVLKKEQDTLGPRIEETMRASITTAI
IVAALGLLFATVLAVLIARSISRPILAITSAMSKLADNQLETEIPGLTYDNEVGLMAKAV
NVFKQNAIKIRQLTAQEAALQQKNADLQSDIATVVSAAVAGDFTSRITKHYDNPDLDAFA
NNVNTLVDSVDKGIAETRRVVSALSNGDLTESMSGRYQGVFAELQTNVNETMTKLRLLME
QVRQSADVINGGADEIRQASNDLSRRTETQAASLEETSSALEEITVAVKTSTERAQESSK
MVSEARRFAEQSADVVQDATAAMSRIEQASNEITQIINVIDEIAFQTNLLALNAGVEAAR
AGEAGKGFAVVAQEVRELAQRSATAAKDIKALITKSSNEVETGVRLVTGTGEALREIQQK
VIGISSQVTSIATAANEQSTGLSEVNTAVNQMDQMTQQNAAMVEEAAASTSKLAEETVNL
LNLISQFKVHKADHGMRRAA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaatgtaaaactcagttacaagatatatggtggtttcggcgtcattatcgcc
attctcatcaccattgccggcatgtcagtctattccaacaccagtaatcagtccaacttt
actgattatcgcgccattgcccggttgaccaatgaagcaggccgcgtgcaggcaaacatg
ctggaagctcgcctggcctttctgagatatcaagccgatcaatccaccgacaatctcgca
gcatttgataagcgtctggccaccgtcaaggaaagcaccgccaatctcttgtccatggcc
cgctccgatgcggagaaatccgcttcagccgggttcacggctgccgttgcagattatgaa
aatggcttcaaggccgtcgtcgccgcccaatcggaacgcgacaaactggtcgatgaaagc
ctcgaccggctaggccctggaattgaaaaatccacctcacaattgctcggtgatttcgac
agcagtggtaataatattgcggcttacaaagccactcagttcctggcctcgaccttcgtc
atgcggctggcggccaccaaatacctgttgaacaacgagaccaaggattacgaagctgcg
atggcggcagcacaggatgcgctggcccgcagcaccgaggttaccgcagccatcgtcatt
cccgaacgcacgcagcgtttcaaagccaccctggatgatctcaacacatatatcagcgat
ctgaccaagatacaggctgttatcaccaagcgtaattccgtcatcaccaatgtcatgaat
accgtcggcccgaaattggccaaggacaccgaagaactgaaactggtcctgaagaaagag
caggacacgctcggccctcgtatagaggagacaatgcgcgcttcgatcacaacagccatt
attgtcgccgcacttggccttctcttcgccaccgtattggcggtgttgatcgcccgcagc
ataagccgtccgatcctggcgatcacctccgccatgagcaagctggccgataaccagttg
gagaccgagattccgggcctcacctatgataacgaggtcgggctgatggccaaggccgtc
aatgtcttcaagcagaatgccatcaaaattcgccagctgactgcacaggaagccgctttg
cagcagaaaaatgccgatctgcaatccgatattgccacagtcgtctcggcagcggtcgcc
ggtgatttcaccagccgcattaccaagcactacgacaatccagatttggacgcctttgcc
aacaacgtcaacacgctggtggactccgtagacaagggtatcgcggaaaccaggcgggtg
gtctccgctctctccaatggcgacctgacggaatccatgagcggtagatatcaaggcgtg
tttgccgaattgcagaccaatgtcaacgaaaccatgaccaagctgcggctgctgatggaa
caggtgcgccaatccgcagatgtcatcaatggcggcgccgatgaaatccgccaggcatcc
aacgatctgtcgcgccggacggaaacccaggcggcctcgcttgaagagacttcgtctgcg
ttggaagagatcaccgtggcggtcaaaacctcgaccgaacgagcacaggaatccagcaag
atggtctctgaagcccgtcggtttgccgagcaatccgccgatgtcgtccaggacgcaaca
gccgccatgagccgcatcgagcaagcctccaacgaaatcacccagatcatcaatgtgatt
gacgagatcgctttccagaccaaccttctggcgctcaatgccggggtggaggccgcccgc
gctggcgaagctggcaagggctttgccgtcgtcgcccaggaagtccgcgaactggcgcag
cggtcggccaccgccgccaaggacataaaggcgctgattaccaaatcgtcgaatgaagtg
gagaccggcgtgaggctggtcaccggcaccggggaagcgctgagggaaatccagcaaaag
gtcatcggcatctccagtcaggtcacttcaattgccacggctgcaaacgagcaatcgacc
ggtctcagcgaagtcaacaccgccgtcaaccagatggaccagatgacccagcaaaatgcc
gccatggtcgaggaggccgccgccagcacctcgaaactggccgaggaaaccgtcaacctg
ctcaatctgatctcgcagttcaaggtccacaaggccgaccacggcatgcgacgcgccgcc
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