Agrobacterium vitis VAR03-1: RvVAR031_09640
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Entry
RvVAR031_09640 CDS
T08810
Name
(GenBank) chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02020
Two-component system
avf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_09640
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAR031_09640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
avf02035
]
RvVAR031_09640
Bacterial motility proteins [BR:
avf02035
]
Flagellar system
Chemotaxis proteins
MCPs
RvVAR031_09640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
DUF948
STX6_10_61_N
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
BCH53354
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Position
1:1067564..1070092
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AA seq
842 aa
AA seq
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MVFDRLLSRCKIQTKVLVFIVPFVLSISAVGLTGYYASRILQGQMDVTNRVVNTLSGFKN
VYAAMTAFLQNTTDASKTALDQELDKQLTSLKTMRTSIDGLGGAAQVDAAIAGTESIAGQ
VKRLWELNQGAADLRAALEADTQQLSSQQSDLLSYSTSVREALAKDENQAKTMLRDSDRL
TRGANLIAQLVTDFNSATDPEAKMSLVKAQMPGLKKAATDIAAALPVEQTVLGTSLTDNI
QQLASQVEIGVTNDTTVGAAEQAINLMRPVSIRLQGASTLKSRQATAVFGTLDQPIAEAT
ALLTATRQLVDISNGVELRSSRFMAAASADGLQKLQASLGTLKRRAAAMAKDPNVSADIK
AKLAQIAPLTDAMGDKATRLVAMDGQKTAAFLAAARDIDTIWSQLSDFAASQRQVADQQS
ASADTMSALALLAGIVIAIVAGIGLIATFKGPINQITAAMRRLASGDLEIEIAGGTRPDE
IGDMARALGVFKDNAEAKIRAEAEGARVRAESEAERARNDAEKQQADQDVQFAVTELAAG
LERLANGDVSATLDHPFAGRMEQLRSDFNRSLTRLKETIGLIQGNVTAIQGNVQQMAHST
DDLSRRTETQAASLEETAAAVNEVTSNVRQAANKAREVNDIVGETRGNAEKSAVVVGNAV
SAMGRIEDASKKIEQIISVIEEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQ
RSGRAAKDIKTLINTSTEEVNAGARLVQETGAALTVISQQIATISTHVEGIASASRDQSA
ALGEVNSAVGQMDSLTQQNAAMVEETSAASRQLADEADQLVGLLQQFKLESGSQAGRWDR
AA
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggtatttgatcgtctactttctcggtgcaagattcagaccaaggttctggtcttcatc
gttccgttcgttctcagtatttcggcagttggtctgaccggctattatgcctcccgtatc
ctgcaagggcagatggacgtcaccaatcgtgtggtcaacacgctgagtggcttcaagaat
gtctatgcggcgatgacagctttcctgcaaaacaccacggatgcatcgaaaacggcgctg
gatcaggagctggataagcagttgaccagtttgaagaccatgcgcacgtcgattgacggt
ctgggcggggcggcgcaggtcgatgcggcgattgccggaacagaatcgattgccggtcag
gtcaagcgcctgtgggaattgaaccagggcgcggcggatctgcgtgcagccctggaggct
gatacccagcaattgtccagccagcagagcgatctgctttcctattccaccagtgtccgc
gaggcgctggccaaggatgaaaatcaggccaagaccatgttgcgtgattccgaccggctg
acgcgcggcgccaatctgattgcccagctggtcaccgatttcaacagtgccacagaccct
gaggcgaagatgagcctggtcaaggcgcagatgccggggctgaaaaaggccgccaccgat
atcgccgccgccctgcctgtggaacagaccgtgctcggcacatcgctgactgacaatatt
cagcaattggcctcccaagtcgaaatcggcgtgaccaatgacacaacggttggcgcagcc
gaacaggcgatcaacctgatgcgtccggtttccatccgcttgcagggcgcgtctaccttg
aaatcccggcaggcgacggcggtgtttggtaccctagatcagccaattgccgaagcaacg
gctttgctcactgccacacgtcagctggtggatatcagcaatggggttgaactgcgcagt
tcacgcttcatggcggcagcatcggcggatggcctgcaaaaattgcaggcttcgcttggc
accctgaagcgtcgtgccgcggccatggccaaggacccgaatgttagtgcagacatcaag
gcaaagctggcccagatcgccccgttgaccgatgccatgggcgataaggcgacccggctg
gtggctatggatggccagaaaacagccgccttcctcgcggcggcccgcgatatcgacacc
atctggtcacagctcagcgattttgccgcctcccagcgccaggtggctgatcagcagagc
gcttctgccgataccatgtcggcgctggctctgctggcgggcatcgttatcgccattgtc
gcgggcattggtttgatcgccaccttcaaggggccgatcaatcagatcaccgccgccatg
cggcgcctggcatccggcgatctcgagatcgagattgctggtggcacacgccccgatgaa
atcggcgatatggcccgcgcccttggcgtgttcaaggacaatgccgaggcgaagatccgc
gctgaggccgagggtgcgcgggttcgggctgaaagcgaggctgagcgtgcccgcaacgat
gcggaaaagcagcaggccgaccaggacgtgcaatttgcggtgacggaactcgccgccggg
ctggagcgcctcgccaatggcgatgtctccgccacgctggatcatccctttgccggacgc
atggaacagttgcgcagcgacttcaaccgctcactgacccggctgaaggaaaccatcggc
ctgatccagggcaatgttaccgccattcagggcaatgtgcagcagatggcccattccacc
gacgacctgtcgcgccgcacggaaacccaggctgcctcgctggaagaaaccgccgccgcc
gtcaacgaagtcacctccaatgtccgccaggccgccaacaaggcgcgtgaggtgaatgat
atcgttggcgaaacccgtggcaatgccgagaaatcggctgtcgtggtcggcaatgccgtc
tccgccatgggccggattgaggatgcctcaaagaagatcgagcagatcatcagcgtcatc
gaggaaatcgccttccagaccaatctgttggcgctgaatgccggtgtcgaggcggcccgt
gcgggcgaggcgggcaagggctttgccgtcgttgcccaggaagtacgcgagctggcgcaa
cgctctggccgcgccgcaaaagacatcaagacgctgatcaatacctccaccgaagaggtc
aatgccggggcgaggctggtgcaggaaaccggtgccgcccttaccgtcatcagccagcag
atcgccacgatcagtacccatgttgaaggcatcgctagcgccagccgcgaccaatcggca
gcccttggcgaagtcaacagcgccgtcggccagatggacagcctgacccaacaaaacgct
gccatggtcgaagaaacctccgccgccagccgccagctggccgatgaggccgatcaattg
gtggggttgttgcagcagttcaagctggaaagcggttcgcaggcagggcgttgggaccgg
gcggcttga
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