Agrobacterium vitis VAR03-1: RvVAR031_09770
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Entry
RvVAR031_09770 CDS
T08810
Name
(GenBank) hypothetical protein
Organism
avf
Agrobacterium vitis VAR03-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS_8
PAS_9
PAS
PAS_4
HATPase_c_3
PAS_7
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
BCH53367
LinkDB
All DBs
Position
1:complement(1085174..1089346)
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AA seq
1390 aa
AA seq
DB search
MPAIQYPFIDIAVHSAVRAKFARGDALALFSPDLERVLWANGAGAGFFGTASVYDFLDQG
PPRQDVTFRQIAAMARQLKTTGEARRLVVRAGSGFRLVPVEAQLERLEIRPGEVVILFSM
PVSYRDASARSEALLRGFEDPDTHMALLDSKGAVIRASGNFDRLGITPRTIETIVQMAQV
QPGGLMKRPIPTARGNLPAALGKIADDPAMFLLFAVETLLGTLDASDGFTEEQPTAASVM
APQVHEPQVSIEPAVAATESSPSETFPAADTIAVEVEEAKSEETKSEETRSTETFEDVVE
ALGSIHELEPEPEDLSQADALSPQPDDHAIGEPVSENEYLPEELSVPEETHPEAEQPPAT
SDATLTEDRQASTDLPDSDFHADVEQDEIEAEDDTRLEETGESEAIAAATDPAEQSEESE
TETTASSADAFEQDDEGETEPAPHSAEETPELSETASEQAARQEETTQQHFAFAPTMRAA
RFVWKVDALGCFSEVSPEFAKAVGPRSAAIEGQTFADLAALFNLDPDGKIVELLKKRDTW
SGKTIYWPIEGTSLKVPVDLAALPTYTRNRDFDGFRGFGVVRLADCIEDIDKVGLTLSAP
FDQTGTTDQTAQADLQEDISDDVADPAEGGKADTIPMPELVEERQEVPALVISAPAPLPQ
AENIVQLKPRHFGREGLSPAEHATFQEIARRLDALGVKSVDGSRDLSPKKGLKDTARDDK
AVLEEQKPSPVEAANADRLRSDADAADTTTESSDTTVPSPTPSPRVERDSLPENDNAKPK
PDADISISQAGDEARDEDEDNDDTADVVSGQEEDSSAETVVEFPAASVRDAGSLDTDEGT
EDEKSAANEMILPVAPVPGALLPRPPRDVVFSPDVLDMLPVALLAHRGDTLIHANPEFLA
LTGYADLDALAQSGGLDALLQRDDLQASEPGPDDARRDGRLVVVRADGDLVPVSARLQSI
RWEEASALLLALVPQAAAKHAETPVADHTPLPVADAVDGSQPGLDHPTRLDAVEHTGLRI
EVEELRSILETATDGVVTISTDGEIRSVNGAASALFNYDEEDIRGKPFVTLFAHESQRAI
LDYLGGLTGHGVASVLNDGREVIGRESSGGFIPLFMTIGRLSSSNGFCAVIRDITQWKRT
EEELRSAKRAAETANAHKTDFLARVSHEVRTPLNAIIGFADIMADERFGPIGHGRYAEYA
ADIGRSGRHVLDIVNDLLDISKIEAGEMDLDFIAVGLNETVSEAVAIVQPQANGQRVIIR
TALSQSVPNVVADMRSIKQIVLNILSNAIRFTPSGGQIIVSTNYEPNGSVTLRIRDTGIG
MTRAELEQAMKPFRQVSPGGARLRGDGTGLGLPLTKAMVDANRASFAIQSTPNEGTLVEI
TFPSPRVLAG
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctatccaataccccttcatcgatatcgccgtgcacagcgcggtcagggccaag
tttgcgcgtggggatgcgcttgcgctgttttcgccggatctggaacgggtgctgtgggcc
aatggcgccggagcgggtttcttcggaacggcttctgtttacgatttcctcgaccaaggg
ccaccacgccaggatgtcaccttccggcagatcgccgccatggcacggcaattgaaaacg
acgggcgaagcgcgccggttagtggttcgggccggttcgggctttcgcctcgtgccggtc
gaagcccagctggaacggctggagatccgccccggcgaagtggttatcctgttttccatg
ccggtcagctaccgggacgcctcggcccgcagcgaagcgctgctgcgcggcttcgaggac
cccgatacccatatggctcttctggacagcaagggcgcagtgatccgtgcatccggcaat
ttcgaccggctcggcattaccccacgcaccatcgaaaccatcgtgcagatggcgcaagtc
cagcccggcggcctgatgaagcggcctattccgacagcacgcggtaacctgccagctgcg
ctgggcaaaattgccgacgaccctgcgatgttcctgctgtttgcagtggaaaccctgctg
ggaacgctggatgcgtcggatgggtttaccgaagagcagcccaccgctgcttccgtaatg
gcgccacaggtccacgaaccgcaggtttcgatagagcccgccgtggccgccactgaatct
tccccatccgagacttttccagccgcagatacaatcgctgtcgaggttgaagaggccaaa
tctgaggaaaccaagtccgaagaaaccagatctacggagactttcgaggacgtggtcgaa
gccctgggcagtatccacgagttggaacctgagccggaagacctgtcccaagcggatgcg
ctgagcccgcagccggacgatcatgccattggcgagcccgtgtctgaaaacgagtacttg
cctgaagaactgtccgttcctgaggaaacccacccagaagcggaacagcctcctgccacg
tccgatgcgacgttgaccgaggatcgtcaagccagcacggatctgccagattcggatttc
catgccgatgtcgaacaggatgagatcgaagccgaggacgatacccgcctagaggaaacc
ggagaatcggaggccatcgccgccgcaactgaccccgctgaacagtctgaggagagcgaa
accgagacaaccgcatcctctgcggacgcttttgagcaagacgatgagggcgagacggag
cccgcgccgcattctgcggaagaaacgcctgaactgtcggaaaccgccagcgaacaggct
gcgcggcaggaggaaaccacccagcagcatttcgccttcgctcccaccatgcgagcagcg
cggttcgtgtggaaggtcgatgcgctcggctgtttcagcgaagtctcaccggaatttgcc
aaggcggtcggcccgcggtccgcggccatcgaaggccagacttttgccgatctggcggcc
ctgttcaatctcgatcccgatggcaagatcgtcgaattgctgaaaaagcgcgatacctgg
tccggcaagacgatctactggccgattgagggcaccagcttgaaagtgccggtcgatctg
gccgccttgccgacctacactcgcaatcgcgattttgatggcttcaggggctttggcgtc
gttcggctggccgattgcatcgaagatatcgacaaggtcggactgaccctaagcgcgccc
tttgatcagaccggcacaaccgaccaaacggcccaagccgatcttcaggaagacatctcg
gatgatgtcgccgatccggcagagggcggaaaagctgataccatccctatgccagaactg
gtggaagagcggcaggaagtgccggccttggtcatcagcgctccagccccccttcctcag
gcggaaaacatcgtccagctcaaaccccgccatttcggccgggaaggcttgagccccgcc
gaacatgcgacctttcaggaaattgcccgcagactggatgcactcggcgtaaaatccgtt
gacggcagccgcgatctatcgcccaagaaggggcttaaggacacggcgcgcgacgacaag
gccgtcttagaagagcaaaaaccatcccctgttgaggcagccaatgccgacaggctgcgg
tccgatgccgacgctgccgatacgacaaccgaatcgtcggatacaacagtgccttcgcca
acaccttcgccgcgcgtcgagcgcgacagcctgcctgaaaatgacaacgccaagcccaag
ccggacgccgatatatcgatatcgcaggccggtgatgaggcccgcgacgaagatgaagat
aatgacgatacggctgacgtggtttctggccaggaagaggactcttcggctgagaccgtc
gttgaattcccagccgcctccgttcgtgacgcgggttcccttgatacggacgagggaacc
gaagatgaaaaaagcgctgcgaacgagatgatcctgccggtcgctcccgtaccgggcgcg
cttctgccacgtccaccgcgcgatgtggtattttcacctgatgtgctggacatgctgccc
gtggcattgcttgctcatcgcggcgataccctgatccatgccaacccggaattcctggcg
ctgacaggctatgccgatctcgatgccctggctcagtccggcgggctcgacgcgcttttg
cagcgtgatgatctgcaagcaagcgaacccggaccggacgacgcgcgccgggatggcagg
ctcgtcgtggtcagggctgatggcgatctggtgccagtctcggcacgtctgcaatcgatc
cgctgggaggaggcaagcgccttgctgctggcgctggtgccgcaggctgcggcaaagcat
gccgagacgcccgttgcagaccatacgcctcttccggttgccgatgccgttgacggttca
cagcctggattggaccatccgacccggctcgatgcagtggagcataccggcctgcgcatt
gaggtggaggaactgcgctccatcctggaaacggcaaccgatggcgtggtgaccatcagc
accgacggcgaaatccgctcggtgaatggcgcggcgagcgcgctgttcaactatgacgaa
gaggacattcgcggtaagccgttcgtgacgctttttgcccatgaaagccagagggcgatc
ctcgattatctgggcgggctgaccggccatggtgtggccagcgtgctcaatgacggacgc
gaagtgatcggccgggaatcctccggcggcttcattccgctgttcatgaccattggtcgc
ctgtcgtcttccaacggcttttgcgctgtcatccgcgacattacccaatggaagcgcacc
gaagaggaattgcgcagcgccaaacgtgccgcagaaaccgccaatgcccataagaccgac
ttcctggcacgggtcagccacgaagtccgcacgccgctgaatgccattatcggctttgcc
gatatcatggcggatgagcgcttcgggccgatcggccatggacgctacgctgaatatgcc
gccgatatcggccgttccggccggcatgtgctggatatcgtcaacgatctcctggatatt
tccaagatcgaggcgggcgaaatggatctcgatttcatcgcggtcggcttgaacgaaacg
gtgtccgaggccgtggctatcgttcagccgcaggcaaacggccagcgggtgatcatccgc
acggcgctgtcgcaatcggtgccgaatgtggtggccgacatgcggtcgatcaagcagatc
gtgctcaatatcctgtcgaatgccatccggttcacgccttcaggtgggcagatcatcgtt
tccaccaattacgagccgaatggcagcgtgacgctgcgcatccgcgataccgggatcggc
atgacgcgggcagaactggaacaggccatgaaaccgttccggcaagtgtctccgggcggc
gcccggttgcgcggcgacggcaccggtcttggactgccgctgaccaaggcgatggtggat
gccaaccgcgccagctttgctattcaatcgacaccgaacgaaggtacgctcgtggaaatc
accttcccttctccaagggttctggcgggatga
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