Agrobacterium vitis VAR03-1: RvVAR031_09900
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Entry
RvVAR031_09900 CDS
T08810
Name
(GenBank) D-amino-acid dehydrogenase
KO
K26064
D-lysine oxidase
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00310
Lysine degradation
avf01100
Metabolic pathways
avf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
RvVAR031_09900
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Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
Pyr_redox_2
FAD_oxidored
FAD_binding_3
Pyr_redox
FAD_binding_2
3HCDH_N
ApbA
GIDA
UDPG_MGDP_dh_N
HI0933_like
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
BCH53380
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Position
1:complement(1100232..1101479)
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AA seq
415 aa
AA seq
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MSVDAIVLGAGIIGVSTAVQLARRGKSVVLVDRRGAGEETSYGNAGLIQREGVVPYGFPQ
DLGLILRYGLNNRIDAHYHLKALPKLTAFLSFYWWHSNKPRHEVIARAYAPLIEHSITEH
KELIEASGAEALIRKDGWVEAFRTQAVRDKEVAEAERLGREYGIQFQTLTAADLAREEPH
LSQDFIGGLKWNDPWSVLDPHGLTKAYLTYFESLGGRFVHGDALSLKQVGGNWQVTTDDG
VIDGKQVVVALGPWSDEVTAKLGYRFLLGVKRGYHMHYASTGNAVLNNWMMDKERGYFLA
PMTQGIRLTTGAEFALRDAPKTPVQLARAEKVARTVFPLAERLDAEPWMGARPCTPDMMP
VIGQAPRHKGLWLAFGHAHHGLTLGPVTGRLLAEAMNGETPFLDISAFRPERFRA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgatgcaattgttcttggcgccggtatcatcggcgtgtccaccgctgttcaa
ctggcgcggcgcggcaaatcggtggtgctggtggaccggcgcggcgcaggcgaggaaacc
tcctatggcaatgccgggctgatccagcgcgaaggggttgtaccctatggttttccgcag
gatcttggcttgatcctgcgctacggtctcaacaaccggatcgatgcacattatcatctc
aaggccctgccgaagctgacggcctttctctccttctattggtggcattccaacaagccg
cgccatgaggtgatcgccagggcctatgcgccgctgatcgagcattcaatcaccgaacat
aaagagctgatcgaggcatcgggggccgaagccctgatccgcaaggacggttgggtcgag
gcgtttcgcacccaggcggtacgcgacaaggaagtggcggaagccgagcggctggggcgt
gaatatggcatccagtttcaaaccctgacagcagccgatctcgcccgtgaagagccgcat
ctgagccaggatttcatcggcgggctgaaatggaacgatccctggtcggtgcttgatccg
catgggctgaccaaggcctatctcacctatttcgaaagtctcggcggacgcttcgtgcat
ggcgatgccctgagcctgaagcaggtgggtggcaactggcaggtcaccactgacgacggc
gtgatcgatggcaaacaggtcgtggtggcgcttggcccctggtcggatgaggtgacggcc
aagctcggctaccgcttcctgcttggcgtcaagcgcggctaccacatgcattatgccagc
accggcaatgcagtgctgaacaattggatgatggacaaggagcgcggctatttcctggcg
ccgatgacccaaggcattcggctgacgaccggggcggaatttgccctgcgcgatgcgccg
aaaaccccggtgcaattggcgcgggccgaaaaagtcgcccgcacggtgtttccactggcc
gaacgcctggacgctgagccctggatgggcgcgcggccctgcaccccggacatgatgccg
gtgatcggtcaggcgccacgccacaaagggctgtggctggcttttggccatgctcaccac
ggcctgacgctcgggccagtcacggggcgtttgctggcggaggcgatgaacggcgaaacg
ccgttcctggatatctcggcctttcgcccggagcggttccgggcctaa
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