Agrobacterium vitis VAR03-1: RvVAR031_10050
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Entry
RvVAR031_10050 CDS
T08810
Symbol
mutL
Name
(GenBank) DNA mismatch repair protein MutL
KO
K03572
DNA mismatch repair protein MutL
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RvVAR031_10050 (mutL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avf03400
]
RvVAR031_10050 (mutL)
DNA repair and recombination proteins [BR:
avf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
RvVAR031_10050 (mutL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
BCH53395
LinkDB
All DBs
Position
1:1116676..1118529
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AA seq
617 aa
AA seq
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MSIKQLSETLINQIAAGEVIERPASAAKELIENAIDAGASRIEIATAGGGKALLRITDNG
CGMDGQDLALAVRRHCTSKLNESLMDIKSLGFRGEALPSIGSVARLTIASRRADSASAFQ
IAVEGGKVGEVRPAPGNPGTVVEVRDLFFATPARLKFLKTERAEAAAITEMVKRMAIAFP
KIRFVLSGSDRSTLELPSTGDDHLARIAQVLGTDFRDNAIALDAEREDVHLGGFAGVPTF
NRGNSAHQYAFVNGRPVQDKLILSAIRGAYAETVPHGRYPVAVLALTVDPALVDVNVHPA
KSDVRFRDPGLVRGLIVGAIRQALTREGDRSSTAGADAMLRAFRPGANGGFAEGAQAAAN
NSYAPAYGARVPQPSAWSVDTSPHRPLDGGQNRFDGLAMPAARADAHVSPSQISEPVAMA
MESGSFRLGAARAQVHANYIVAQTQDGLVIVDQHAAHERLVFEDMRKALSGRRLPSQGLL
IPEIISLPEEDCDRLMEHAENLDKLGLAIERFGPGAIAVRETPAMLGEVDVPGLVRQLAD
EIAEWETAGSLFARLEHVAATMACHGSVRSGRLLRVEEMNALLRKMEETPGSGQCNHGRP
TYIELKLSDIERLFGRS
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaaacagctttcggaaaccctgatcaaccagatcgccgctggcgaagtgatt
gagcgtccggccagtgccgccaaggaattgatcgaaaacgccatcgatgccggagcaagc
cgcatcgagatcgccacggcgggtggcggcaaggccctgttgcgcatcaccgacaatggc
tgcggcatggatgggcaggatctggcgctggcggttcgccgtcattgcacttccaagctc
aatgagtcgttgatggatatcaagagcctcggttttcgcggcgaggcgctgccgtccatc
ggttcggtggcgcgcctgaccattgccagccgcagggcagacagcgccagtgctttccag
atcgcggtggaaggcggcaaggttggagaggtgcgccccgcacccggcaatcccggcacg
gtggtcgaggtgcgtgacctgtttttcgccacgccagcccggctgaaattcctgaaaacc
gagagagccgaggctgcggcgattaccgaaatggtcaagcgcatggccatcgcctttccg
aagatccgcttcgtcctgtctggctcggatcgttcaacgctggaactaccgtcgaccggc
gacgatcatctcgcccggattgcccaggtcctcggcaccgatttccgggacaatgccatt
gcgctcgatgccgaacgagaggacgtgcatctgggcggctttgccggtgtgccgaccttc
aaccgtggcaattccgcccatcaatatgccttcgtcaatggccgtccggtgcaggacaag
ctgatcctgtcggccattcgcggtgcctatgccgaaaccgtgccgcatggccgctatccg
gtagcagtgctggcgttgacggttgatccggctctggtggatgtcaatgtccatccggcc
aagtcggatgtgcggtttcgagatcccggcctggtgcgcggcctgattgtcggggcaatc
cgtcaggccttgacgcgcgaaggcgaccggtcatcgacggcaggggccgatgccatgctg
cgggcctttcgtcctggtgcaaatggcggttttgccgaaggcgcgcaggcggctgcgaac
aattcctatgcgcccgcctatggcgcacgggtgccgcagccttcagcatggagcgtcgat
acatccccccataggccgctcgatggtggtcagaaccggtttgacggtctggcgatgcca
gcggcccgggcggatgcgcatgtttcgccctcacagatctccgagccggtggcgatggcg
atggaaagtggctcgtttcgcctcggcgcggcgcgggcgcaggttcacgccaattatatc
gttgcccagacgcaggatggactggtgatcgtcgatcagcatgccgcccacgagcggctg
gtgtttgaagatatgcgcaaggctctatcgggtcgcagattgcccagtcagggcttgctc
attcccgaaatcatcagtttgccggaagaagactgtgaccggctgatggaacatgccgaa
aacctcgataagctgggccttgctatcgaacggttcgggccgggagcgattgccgtgcgc
gaaacgcctgccatgctgggtgaagtggatgtgccgggacttgtgcggcaattggccgat
gaaattgccgaatgggaaacggcgggcagtctgtttgcccggctggagcatgtggccgct
accatggcctgccacggatcggtgcgctccggtcggctgttgcgggtcgaggaaatgaat
gcgctgctgcgaaaaatggaggaaacacccggttccggccaatgcaatcacgggcgccca
acctatattgaactgaaactgtcggatatcgagcgactgttcggtcgcagttga
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