Agrobacterium vitis VAR03-1: RvVAR031_10520
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Entry
RvVAR031_10520 CDS
T08810
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00230
Purine metabolism
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
Module
avf_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RvVAR031_10520 (purD)
Enzymes [BR:
avf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
RvVAR031_10520 (purD)
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Motif
Pfam:
GARS_A
GARS_N
GARS_C
ATP-grasp_3
CPSase_L_D2
ATP-grasp
B1
Motif
Other DBs
NCBI-ProteinID:
BCH53442
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Position
1:complement(1167967..1169247)
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AA seq
426 aa
AA seq
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MNILLIGSGGREHALAWKLAQSPLIGAFYAAPGNPGIAEHAELVDINIDDHAAVIAFCKD
KAVDFVVVGPEAPLVAGLADALRDAGLTVFGPSAAAAQLEGSKGFTKDVCARFNIPTGAY
QRFNNAPKAKAYVRQQGAPIVIKADGLAAGKGVTVAMTLDEALSAIDDCFEGAFGAAGAE
VVVEAFLDGEEASFFCLCDGKTLLPLATAQDHKRVGDGDTGPNTGGMGAYSPAPVMTPDM
VERTLREIIEPTMRGMAELGMPFSGVFFAGLMITEKGPELIEYNVRFGDPECQVLMMRLK
SDLLPLLHACASGTLDQVSAEWHDDPALTVVLASKGYPGSFTRNTPIATVPSASDEAKVF
HAGTAVKHGQLIATGGRVLNATARGKTVAEAQAKAYALARQVEWDNGFSRSDIGWQAIAR
EKQSES
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaatattctgctgatcggttcgggtggacgtgaacatgcgctggcctggaagcttgcc
caatcgccgctgatcggcgccttctacgccgccccaggcaatcccggcattgccgaacat
gccgaactggtcgacatcaacatcgacgaccacgccgccgtcatcgccttctgcaaggac
aaggccgtggatttcgtggtggtcgggccggaagcgccgctggtggccgggcttgccgat
gcactgcgcgatgcaggcctgactgttttcggtccatcggcggcagccgcgcagctggaa
ggctccaagggctttaccaaggatgtctgcgcccgcttcaatatcccgacaggtgcttat
cagcgcttcaacaatgcgccgaaagccaaggcctatgtgcgccagcagggcgcgccgatc
gtcatcaaggccgatggtctggcggctggcaagggcgtgaccgtggcgatgacgctggac
gaggcgctgtcggctatcgatgattgtttcgaaggcgccttcggggccgcaggcgccgaa
gtggtggtggaagcgtttctggatggtgaggaagccagcttcttctgtctttgcgatggc
aagacgctgctgccgctggccaccgcccaggaccataagcgggtcggcgatggcgatacc
ggccccaataccggcggcatgggtgcctattcccctgcccccgtgatgacgcctgatatg
gtggagcgcactttgcgcgagattatcgagccaaccatgcgcggcatggcggaactgggc
atgccgttttccggtgtgttctttgcggggctgatgatcaccgaaaaaggccccgaactg
atcgaatacaatgtccgctttggcgacccggaatgccaggtgctgatgatgcggctgaaa
agcgatcttctgccgctgctgcatgcctgcgcatccggcacgctggatcaggtttccgcg
gaatggcacgacgacccggcgctgactgtggtgctggcctccaagggttatcccggcagt
ttcaccagaaataccccgattgccactgttccctccgccagtgatgaggcaaaggttttc
catgccggcaccgccgtgaagcacggccaattgattgctaccggcggacgcgtgctgaac
gccacggcccgcggcaagacggtggctgaagcccaggcaaaggcctatgcgctggcccgg
caagtcgagtgggacaatggtttcagccgcagcgatatcggctggcaggcgattgcccgc
gaaaagcagtcggaatcctga
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