KEGG   Agrobacterium vitis VAR03-1: RvVAR031_10540
Entry
RvVAR031_10540    CDS       T08810                                 
Name
(GenBank) RNA-binding protein
  KO
K06959  protein Tex
Organism
avf  Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:avf00001]
 09190 Not Included in Pathway or Brite
  09192 Unclassified: genetic information processing
   99973 Transcription
    RvVAR031_10540
SSDB
Motif
Pfam: Tex_central_region Tex_YqgF HHH_3 Tex_N HHH_9 S1 HHH_7 YqgF S1_RRP5 T2SSK HHH_6 OB_RRP5_4th
Other DBs
NCBI-ProteinID: BCH53444
LinkDB
Position
1:1170597..1172909
AA seq 770 aa
MADDIKSIAALIASEINARADQVISAVDLLDGGATVPFIARYRKEVTGGLDDTQLRNLAE
RLTYLRELGARRKAIVDSISSQDKMTDELAIKIARTTTKAELEDIYLPYKPKRRTRAEIA
REKGLEPLANAIWEDRSSDPAKLAEAYVKGEVADVKAALEGARDIVAEAMAENADLLKSL
RNYLKDKAILYSKVQDGKQASGEKFADYFEHFERWATVPGHRALAMLRGWNEEILTLTIE
ADKDDTSAIKPTHRMIASAYQIGQKGPADQWLMEVAGWTWRVKLSMSLSLDLMRDLRERA
EEEAIHVFARNLKDLLLAAPAGSRPTMGLDPGIRTGVKVAVVDGTGKVLETTTVYPFPPK
NDIRGTQAELAGLIRKHGVDLISIGNGTGSRETEKLVADMLAQLPATGKKPTKVIVSEAG
ASVYSASELAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVDQGRL
GRSLDAVVEDAVNAVGVDLNTASAPLLARVSGLGGSIAEAIVAHRDQTGPFSSRKDLLKV
ARLGARTFEQCAGFLRIPDGKEPLDASSVHPEAYGVAKKIVAACGRDLRTLMGDSSLLKG
LDPRQFVDEQFGLPTVKDILAELEKPGRDPRPSFKTATFADGVEEITDLKPGMLLEGTVT
NVAAFGAFVDIGVHQDGLVHVSQLADKFVKDPHEVVKAGDVVKVRVVEVDVKRKRIALTM
RKEGGEAPPPSARDNRGPAVMRNANPKPARDEKPAMGGLGAALAEAMRKK
NT seq 2313 nt   +upstreamnt  +downstreamnt
atggctgacgatatcaaatccattgccgcgctgattgccagcgagatcaatgcccgagcc
gatcaggtgatctccgcggtggatttgctggatggtggcgccacggttcccttcatcgcc
cgctaccgcaaggaagtcaccggcggacttgatgatacgcaattgcgcaatctggccgag
cgcctaacataccttcgtgaacttggcgcgcgccgcaaggcgattgtcgacagcatctca
tcgcaagataagatgaccgatgaactggccatcaagattgcccgcaccaccaccaaggcg
gagctggaagatatctatctgccctataagcccaagcgccgcacccgtgcagaaatcgcc
cgcgaaaaaggcctggagccgctggccaacgcgatttgggaagaccgcagcagcgatccg
gccaagctggcagaagcctatgtgaagggcgaagtggccgacgtcaaagcggctctggaa
ggcgcgcgcgatatcgttgccgaagccatggcggaaaatgccgacctgttgaaaagcctg
cgtaattacctgaaggacaaggcgatcctctattccaaagtacaggatggcaaacaggcg
tctggcgagaaatttgccgattattttgaacatttcgagcgctgggccacggtgccgggc
caccgggcgctcgccatgctgcgcggctggaatgaagagattctgacgctgaccattgag
gcggacaaggacgataccagcgctatcaagccaactcatcgcatgatcgcgtccgcctat
cagattggccagaaaggccccgccgatcaatggcttatggaggtggcgggctggacctgg
cgcgtcaaactgtccatgtcgctgtcactggacctgatgcgcgacctgcgggagcgggcc
gaggaagaggccattcacgtttttgcccgcaatctcaaggatttgctgttggcagcgcct
gccggttcgcgccccaccatggggcttgatccgggtattcgcaccggcgtcaaagtcgct
gtggtcgatggcaccggcaaggtgctggagaccacaacggtctatcctttcccgccgaaa
aacgacattcgcggcacgcaggccgagctggcgggcctgatccgcaagcacggcgtcgat
ctgatctctatcggcaatggcactggcagccgcgagacggaaaagctggtggccgatatg
ctggcgcaattgcctgcgaccggcaagaaacctaccaaggtcatcgtttcggaagcaggc
gcctcggtctattcggcgtcggaactggcggccaaggaattccccaatctggatgtgtcc
ttgcgcggggcggtgtccattgcccgccgtttgcaggatccattggcggaactggtgaag
atcgatccgaaatccatcggcgttggtcagtatcagcatgatgtcgatcagggccgtcta
ggccgttcgctggatgccgtagtcgaagatgcggtgaatgcggtcggcgttgatctcaac
accgcatccgctccgctcctggcgcgggtgtcgggtttgggcggatcgattgccgaagca
atcgttgcacatcgtgaccagaccggtccgttttccagtcgcaaggatctgttgaaagtg
gcgcggcttggtgcacgcaccttcgagcaatgcgccggatttctgcgcattcccgatggc
aaggagccgctggatgcttcgtctgttcacccggaagcctatggcgttgccaagaagatt
gttgcggcctgcgggcgcgatctgcgcaccctgatgggcgatagcagcctgttgaaaggg
ctggacccgcgccagttcgttgatgagcagtttggtctgcccacggtgaaggacattctg
gccgagctggaaaagccgggccgtgacccgcgcccgagttttaagactgccacctttgct
gatggtgtggaagaaatcaccgacctgaagcccggcatgttgctggaaggcacagtcacc
aatgtcgcggccttcggagcctttgtcgatatcggcgtgcatcaggatgggttggtgcat
gtctcgcaattggccgacaagttcgtcaaagacccccatgaggtggtcaaggccggtgat
gtggtgaaagtccgggtggtggaagtggatgtgaagcgcaagcgcattgcgctgaccatg
cgcaaggaaggtggagaggcgccgccgccatcggcgcgcgataatcgtggcccggcggtg
atgcgcaatgccaacccgaaaccggcccgtgatgaaaagccggcgatgggtggcctgggg
gcggccctggccgaggcgatgcgcaagaaataa

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