Agrobacterium vitis VAR03-1: RvVAR031_10690
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Entry
RvVAR031_10690 CDS
T08810
Name
(GenBank) hypothetical protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02020
Two-component system
avf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_10690
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAR031_10690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
avf02035
]
RvVAR031_10690
Bacterial motility proteins [BR:
avf02035
]
Flagellar system
Chemotaxis proteins
MCPs
RvVAR031_10690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
Sec8_N
DUF6594
Motif
Other DBs
NCBI-ProteinID:
BCH53459
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Position
1:1188087..1189922
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AA seq
611 aa
AA seq
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MSFLSNITIAKKIYIASGLGVAMVVGMVANQQWTNSTIKAAQDIVAREQTVLDGISASEK
AFVEMKSGVRNIMLAPTVKEVDAELAAVNKSALNGQNSLKEAMRVAVNADALQAISTGLG
DYATASIKIKDFVKEQRAQQSQDLVALTARRDQYTRPITSKLNESIQSAVAASRKVTTDA
RNSLQATEARSATINGTIQILIVLVLIATAFVLRSTVVMPIKLLVEAMNRLSSGDTSRRA
DFGPRGDEIGLMCDAVEVFREDAVAKRQLEAEAETNRRRAEQERIQTQLKAEEDARERLM
IATSGLAAGLRRLASGDLTVELREAFSEEFESLRQDFNQSVRTLGETMGAILDSVSNINN
GSTEIASGAGDLSKRTEQQAAALEETSAALDEITVNVSNSAKRTQEARAVVIEANKAARQ
SGQVVANAVDAMQRIEASSSQISNIIGVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVV
AQEVRELAQRSAQAAKEIKELIRNSSDEVGNGVNLVRDTGNVLKTIEDYVSTANGHMDAI
ATSAQEQSVGLTQVNSAVNHMDQMTQQNAAMVEETTAASASLAGEVNKLRQLLGQFQIGQ
GAGNSGMSYAA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttttatcaaatatcaccatcgcaaagaagatctacattgcctcggggcttggc
gtcgccatggttgtgggcatggttgccaatcagcaatggacgaacagcacgatcaaggca
gcgcaggacattgtcgcccgtgagcaaacggttctcgatggtatctcggccagcgaaaaa
gcgtttgtggagatgaagagcggcgtacgcaacatcatgctcgcacccaccgtcaaggag
gttgatgccgagctggcggcggtgaataaatcagccctcaatggtcagaacagtctgaaa
gaggcgatgcgcgttgcagtgaacgcggatgcgttgcaggccatttcgacaggtctcggc
gattacgcaaccgcttccatcaagatcaaggatttcgtcaaagagcagcgggcccaacaa
agtcaggacctcgtcgcgctgactgcacgacgtgatcaatataccagaccgatcacctcg
aaactcaacgagtccattcaaagcgcggttgcggcatcccgcaaggtaacgacagatgcc
cgcaactctcttcaagcgacggaagcgcgctccgcgacgatcaacggtacgatccagatt
ttgattgtgctggtattgatcgcaacggcttttgtattgcgcagcaccgtggtgatgccg
atcaaattgctggttgaagccatgaacaggctctcctctggcgatacaagccgtagggcc
gattttggcccacggggcgatgaaattggcttgatgtgcgatgcggttgaggttttccgc
gaagatgcagttgccaagcgtcagctggaggcagaggcggaaacgaaccgccgccgtgct
gaacaggagcgtatccagacgcagctgaaggccgaggaagacgcccgagaacgcttgatg
attgcgacctccggtctggccgcaggtctgcggcgcttggccagtggcgatctgacggtt
gagctgcgcgaagccttttcagaagagtttgaaagcctgcggcaggactttaatcaatcg
gtgcgcacgcttggtgaaaccatgggcgctatcctcgactctgtcagcaacatcaataac
ggttccactgagattgcgtctggcgcaggtgatctttctaaacgcaccgaacagcaggcg
gcagcacttgaagaaacctctgccgcgctggatgaaattaccgtcaacgtgtccaactcg
gccaagcgcacccaggaggcccgcgccgttgtcatcgaggccaacaaagcagcccgccaa
tccggccaggtggtggccaacgccgtcgatgccatgcagcgcatcgaggcatcttccagc
cagatctccaacatcatcggggtgatcgacgaaattgccttccagaccaaccttctggcc
ctgaacgcaggcgttgaagccgcccgtgcaggcgaagcgggcaagggctttgcggtggtt
gcccaggaagtgcgtgaactggcccaacgctcggcgcaagccgccaaggaaatcaaggaa
ctgatccgcaattcctccgacgaagtgggcaatggcgtcaacctcgtgcgtgataccggc
aatgtccttaaaaccatcgaggattacgtctccaccgccaacggccacatggacgccatc
gcgacctcggcacaggagcaatccgtaggcctcacccaggtcaacagcgccgtcaaccac
atggaccagatgacccagcaaaacgccgccatggtcgaagaaaccaccgccgccagcgcc
tctctggccggtgaggtcaacaagcttcggcaattgttggggcagttccagattggccag
ggtgccgggaattctgggatgtcttatgcggcgtga
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