Agrobacterium vitis VAR03-1: RvVAR031_10800
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Entry
RvVAR031_10800 CDS
T08810
Name
(GenBank) methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02020
Two-component system
avf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_10800
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAR031_10800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
avf02035
]
RvVAR031_10800
Bacterial motility proteins [BR:
avf02035
]
Flagellar system
Chemotaxis proteins
MCPs
RvVAR031_10800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
dCache_1
HAMP
MCP-like_PDC_1
HAMP_2
ATG17_like
GCN5L1
Motif
Other DBs
NCBI-ProteinID:
BCH53470
LinkDB
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Position
1:complement(1199182..1201269)
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AA seq
695 aa
AA seq
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MARNLNLMSKILIAACAAVVLVLCGFSLYIDRLQRSTIGKTVADEINSSGLQASESIANW
LNARVMLTEFAGQAAGKIGTPEGILTEFDNPVLLREFMSTYVGHQADGKFTSVPFQPLPE
GYDPRIRPWYQGAVKANKVVLTEPYTDASTGQLILSAAVPVKREGQLYGVAASDFSLKTL
VGLIKAVDIGGKGSAFLVNSNGTILVHPDQALVTKTLSDVFPAETPKIGGGLVESQFAGK
PVLVNFMPIKGLPVDGWYLTLVVDEAKAYAAIGEFRLAAVIATVIGVIAMVGILALVLST
LVVRPVVQMTTAMSKLAGGDVSAAIPGVQRKDEIGQMGAAVAVFRDNAIERVRLEREADS
TRTMSEQERRDREAVKAREAEQVSFAVHALADGLGRLADGDLAHSIETPFAGDLERLRFD
FNAAVAKLHDAMAAVGQNARQIDGGAMEIRASADNLARRTEQQAASVEQTAAALEEVTTT
VRDSAHRAEEVGQIVTRARSGAEKSGEIVQNAVNAMEAIETSANQISNIIGVIDEIAFQT
NLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSATAAKEIKQLIRVSGEQVANGVSLV
SQTGAALDGIINEVQEINKHINAIVVASREQSQGLQEINAAVNVMDQGTQQNAAMVEEQT
AASHGLAQEAAALTELLAQFRLARDAANLTQRRAA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggccagaaatttgaacctgatgtccaagattctgatcgccgcatgtgcggctgttgtc
ttggtcctctgtggattttcgctctatattgatcgtcttcagcgctcgaccattggcaag
actgtggctgacgagatcaattcttccggcctgcaagcctcggaaagcattgccaattgg
ctgaatgcccgcgtgatgctgacggaatttgccggtcaggctgctggcaagatcggcacg
ccagaggggattttgaccgaatttgacaatccggtactgctgcgcgaattcatgtccacc
tatgtcggccatcaggcagatggcaagtttacctcggttccgttccagcctctgccggaa
ggctatgatccccgcattcgtccctggtatcaaggcgcggtgaaggccaataaggtcgtg
ctgacagagccatataccgacgcatcgaccgggcagttgatcctaagtgcggcggtgccg
gtgaaaagagagggccaattatatggcgtcgctgccagcgatttctccttgaaaacactg
gttggcctgatcaaagccgttgatattggcggcaagggttcggcttttctcgtcaacagc
aatggcacgattctggttcatccagatcaggcattggtgacaaagacgctttcggatgtc
tttccggctgaaacaccgaaaatcggtggtggcttggtggaaagccagttcgccggtaag
ccggtgctggtcaacttcatgccgatcaagggcctgccggtcgatggctggtatctgacg
ctggtggtggatgaggcaaaggcctatgccgcgattggcgagttccgtcttgccgccgtc
atcgctacggtgattggcgtgatcgccatggtcggtattctcgcattggtgctctcgacc
ctggtggtgcgtcctgtggtgcagatgaccacggcgatgagcaagctggccggcggcgat
gtgtctgcggccattcccggcgtgcagcgcaaggatgagatcggccagatgggtgcggcg
gtcgctgtattccgtgacaacgctatcgagcgggttcgtctggaacgcgaggccgactcc
acccgcacgatgagtgaacaggaacggcgcgaccgggaagccgtaaaggcacgtgaagcg
gaacaggtgtcctttgcggtacatgcgctggctgatggacttggcaggcttgccgatggt
gatctcgcccatagcatcgagacaccttttgccggtgatcttgagcggctgcgcttcgac
ttcaatgcagcagtggcaaagctgcacgacgccatggctgccgttggccaaaacgccaga
cagattgatggcggtgccatggaaatccgcgcctcggctgataatcttgcacgccgtaca
gaacagcaggccgcctcggttgagcagaccgcagcggcgctggaagaggtaacaaccacc
gtcagagatagcgcccatcgcgccgaagaggtgggccagatcgtgacccgcgcccgcagc
ggggcggaaaaatccggcgagattgtccagaatgcggttaatgcgatggaagccatcgag
acatccgccaaccagatttccaacattatcggggtgatcgacgaaatcgccttccagacg
aatcttctcgctctcaacgcgggcgtggaagcagcccgcgctggtgaggctggcaaggga
tttgccgttgtcgcccaggaagtgcgcgaattggcccaacgttcggcaacagctgccaag
gaaatcaagcaattgatccgggtctcgggcgagcaggtggcaaacggcgtatcgctggta
agccagaccggtgcggccctagacggcattatcaatgaggttcaggaaatcaacaagcat
atcaatgctattgttgttgcctcccgtgaacagtcacagggattgcaggaaatcaatgcc
gctgtgaatgtcatggatcaaggcacgcaacaaaatgccgccatggtcgaagagcaaaca
gcggcaagccatggactggctcaagaagctgcggctctgactgaattgctggcgcaattc
agactggcccgggacgcggcaaaccttacgcaacggcgcgccgcctga
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