Agrobacterium vitis VAR03-1: RvVAR031_10860
Help
Entry
RvVAR031_10860 CDS
T08810
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00730
Thiamine metabolism
avf00900
Terpenoid backbone biosynthesis
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RvVAR031_10860 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RvVAR031_10860 (dxs)
Enzymes [BR:
avf01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
RvVAR031_10860 (dxs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
Transketolase_N
Motif
Other DBs
NCBI-ProteinID:
BCH53476
LinkDB
All DBs
Position
1:complement(1209864..1211783)
Genome browser
AA seq
639 aa
AA seq
DB search
MTSKPNTPLLDQVVFPSDLRKIEDKDMPQVARELRDEMIDAVSVTGGHLGAGLGVVELTL
AIHKVFNTPEDRLIFDVGHQCYPHKILTGRRERIRTLRQEHGLSGFTKRTESEYDPFGAA
HSSTSISAGLGMAVAAELGQTDRKVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDN
DMSIAPPTGAMSAYLARLASGRTYMGMREIGKKLTAYLGKNIDRAITRAVEHARGYVTGG
TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNAKGPVLIHVVTQKGKGYAPAEAAADKYH
GVNTFDVITGTQAKAKPNAPSYTAVFADALVEEARHDEKIVGITAAMPSGTGLDKLQNLF
PERTFDVGIAEQHAVTFAAGLAAEGYKPFCALYSTFLQRGYDQVVHDVAIQGLPVRFPID
RAGFVGADGPTHAGAFDTGFLASLPGFVVMAAADEAELKHMVRTAAAYDEGPISFRYPRG
EGVGIQMPERGEILQIGKGRIIKEGSKVALLSFGTRLAECLVAAEDLDAAGLPTTVADAR
FAKPLDLDLIRQLARHHAVLITVEEGAVGGFGSQVLHMLANEGLLDHGLKVRSLVLPDLW
MDQAKPDVMYEKAGLDAKGIVSTVFTALSRDALAQDSLA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
gtgacatcgaagccaaacacgccgttgctggatcaggtcgtgtttccgtccgaccttcgc
aagatcgaagacaaggacatgccgcaagtagcgcgtgaactgcgcgacgagatgatcgat
gctgtgtcggtgaccggcggacatctgggcgccgggcttggcgtggtggaactgacgctc
gccatccacaaggttttcaacaccccggaagaccggctgatcttcgatgtcggacaccaa
tgctatccacacaagatcctgaccggacggcgtgagcgcatccgcacgctgcgccaggaa
catgggctgtccggcttcaccaaacgcactgagagcgaatacgatccgtttggcgcggcg
cattcctccacatcgatttccgcaggtcttggcatggccgtggcagccgagcttggccag
accgaccgcaaggtcatcgctgtgattggtgacggcgccatgtcggcgggcatggcgttt
gaggcgctgaacaatgctggcgcgctggatgcgcggctgatcgtcattctcaacgacaat
gacatgtcgattgccccgccaaccggcgcgatgagcgcctatctggcacggcttgcctcc
gggcgcacctatatgggcatgcgcgaaatcggcaaaaaactcactgcctatctcggcaag
aatatcgaccgggcgatcacccgcgccgtcgaacatgcgcgcggctatgtgaccggcggc
acgatgttcgaggaaatgggcttttaccatatcggcccgattgacggccattcctttgat
catctcctgccggtgctgcgcaatgtgcgcgacaatgccaaggggccggtgctgatccat
gtggtgacccagaagggcaagggctacgcgcccgccgaggccgctgccgacaaatatcac
ggagtcaacacctttgacgtgattaccggcacccaggccaaggccaagccgaatgcgccg
agctataccgccgtgtttgccgatgcgctggtggaagaagcccgccatgacgagaagatc
gtcggcattaccgccgccatgccctccggcaccgggctggataagctacaaaaccttttc
ccggaacggacctttgatgtcggcattgccgaacagcatgccgtgacctttgccgcaggc
cttgccgctgagggctacaagccgttctgtgcgctctattcaaccttcctgcaacgcggc
tacgatcaggtcgtgcatgacgtcgctattcaaggtctgccggtgcgctttcccatcgac
cgcgccggtttcgtcggcgccgatggtccgacccatgcaggggctttcgataccggtttt
ctcgccagcctgcccggtttcgtggtgatggcggcagcggacgaagcagagctgaaacat
atggtgcgcaccgccgccgcctatgatgagggtccgatttccttccgctatccgcgcggt
gaaggcgttggcatccagatgccggagcgtggcgagattttgcaaatcggcaagggccgg
atcatcaaggaaggctcgaaagtggcgctgctgtccttcgggacgcggctcgctgaatgt
cttgtcgcagcagaagatctcgatgccgctggcctgccgacgactgtggccgatgcaagg
tttgccaaaccgctcgaccttgacctgatccgccagcttgcccgccaccatgccgtattg
atcacagtcgaggaaggtgcagtcggcggttttggatctcaagtcctgcatatgctggcc
aatgaaggcctgcttgaccacggcctcaaagtccgcagcctggttctgccggatctgtgg
atggaccaggccaagcctgacgtcatgtatgaaaaggcgggccttgacgccaagggcatc
gtttcaacggtgtttacggcgctgtcgcgtgatgccctggcccaagatagcctagcatag
DBGET
integrated database retrieval system
