Agrobacterium vitis VAR03-1: RvVAR031_11330
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Entry
RvVAR031_11330 CDS
T08810
Name
(GenBank) ABC transporter
KO
K02074
zinc/manganese transport system ATP-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_11330
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Putative zinc/manganese transporter
RvVAR031_11330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_23
RsgA_GTPase
SMC_N
AAA_25
AAA_16
ATPase_2
AAA_27
ABC_ATPase
SbcC_Walker_B
MMR_HSR1
AAA_24
AAA_14
nSTAND1
AAA_22
NPHP3_N
AAA_30
NACHT
AAA_15
AAA_35
AAA
Zeta_toxin
MukB
cobW
nSTAND3
T2SSE
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BCH53523
LinkDB
All DBs
Position
1:complement(1254895..1255659)
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AA seq
254 aa
AA seq
DB search
MSDPVIRLTNLTVAYDRHPAVHHVNGVIETGSLTAIAGPNGAGKSTLLKAIIGELRPAEG
AVEHSLKRTDFGYLPQAADINRRFPISVLDTVLLGAWRNSGAFGRIARSDMDKAGQALAM
VGLEGFEKRHIGALSAGQFQRVLFARLLLQDAKVILLDEPFTAIDARTTRDLIDIIRGWH
GDGRTVIAVLHDFDQVRSHFPQTLLLARELVSWGPTQDALSSANLLKARAMAERWDEDAE
VCRPADQKTSRPAA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcccgtgatccggcttaccaatctgaccgtcgcctatgaccggcatcccgct
gtacatcacgtcaacggcgtgatcgagaccggtagcctgacggcgatagccgggccgaac
ggggcggggaaatccaccctgctgaaggcaatcatcggcgagttgcgccccgccgaaggg
gcggtggagcatagtctgaagcgcacggatttcggctatctgccccaggccgccgacatc
aaccgccgatttccaatcagcgtattggacaccgtgttgctcggtgcctggcgcaacagt
ggcgcttttggccgcatcgcccgatccgacatggacaaagcaggccaagctctggcaatg
gttgggctggagggcttcgagaagcgccatatcggcgcgctatccgccggccagttccag
cgtgtgctgtttgcccggttgctgctgcaggatgccaaggtgatcctgctggacgagcct
ttcaccgccattgatgcccgcaccacccgcgacctgatcgacattatccgtggctggcac
ggtgatggccgcacggtgattgcggtcctgcatgatttcgaccaggtccgcagccatttc
ccccaaaccctgctgctggcccgcgaactggtcagctgggggccgacccaggacgccctg
tcatcagccaatctgctcaaggcccgcgccatggccgagcgctgggacgaggatgccgag
gtttgccgcccggcagaccagaaaacatcaaggcccgccgcatga
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