Agrobacterium vitis VAR03-1: RvVAR031_12400
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Entry
RvVAR031_12400 CDS
T08810
Name
(GenBank) methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02020
Two-component system
avf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_12400
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAR031_12400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
avf02035
]
RvVAR031_12400
Bacterial motility proteins [BR:
avf02035
]
Flagellar system
Chemotaxis proteins
MCPs
RvVAR031_12400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
HAMP
TarH
HSNSD_N
DUF948
INTS7_HB
Motif
Other DBs
NCBI-ProteinID:
BCH53630
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All DBs
Position
1:complement(1376577..1378394)
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AA seq
605 aa
AA seq
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MRISLGQLLISLFAVILLVVVGQGIYAVTSLNTISDGTNQIVDKRVPSFILMGQINADLG
DIRVAQSNYRSATTPEQRAAFLGSLNKAYDALEKARKQYEPLIVDKEDQALYDTFSKDWA
KAEQLWQRVKTLTDSGSADEAKQLFLGESLATYAKAGDDIQAAVDDLSDNVKDEGASNAQ
QISLATTVTYIALALAFSIGIGAALVSSLRVVRPLKHMTDNMRTLSSGDTSGNVPYMSRK
DEIGAMAAALQVFKDGILRNRALEAEAAANREKAESEKLRLQQEAEAAAQKKLQEATAGL
ASGLKRLAAGDLGFELKEPFAPEFEALRLDLNAAVAQLGSTIATVATSANAISDGSREVS
QSADDLSKRTEQQAASLEETAAALDQITVNVSNSSRRVEEARGVAKEANSSAVHSGQVVG
EAISAMQRIEHSSNQISNIITVIDEIAFQTNLLALNAGVEAARAGEAGRGFAVVATEVRE
LAQRSAKAAREIKELINKSTQEVENGVRQVQETGEVLKAIEQHVTTINGLMDAIATSSRE
QSVGLSEVNTAVNQMDQVTQQNAAMVEETSAASANLAQESVRLQQLVSRFIVPGGSRSFD
NRYAA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatctcgcttggtcaacttctcatatcactgttcgcagtcattcttctggtggta
gttggccagggcatttatgcggtgacgtcgctgaacaccatatcggacgggaccaaccag
atcgttgataagcgggttccctccttcatcctcatggggcagatcaatgccgacctgggc
gatatccgcgttgcgcagagcaattatcgcagcgccaccacgcctgaacagcgggcggcg
tttctgggatcgctgaacaaggcctatgacgcactcgagaaggctagaaagcagtatgag
ccgctgatcgtcgacaaagaagaccaggcgctttacgacaccttctccaaggactgggcc
aaggcagaacaattgtggcagcgggtcaagacgttgacggacagcggcagtgccgatgag
gcaaaacagctgtttctgggagagtccctggcgacctatgccaaggctggtgatgatatc
caggccgctgttgacgatctgtccgacaacgtgaaggacgaaggtgcctccaacgcgcag
cagatttctctggccacgaccgtgacctatatcgcccttgctttagcgttcagcatcggc
atcggtgcggcattggtcagcagtctgcgggtcgtgcgtcccttgaagcacatgacggac
aatatgcggaccttgtcttccggcgataccagcggcaacgttccttacatgagccgcaag
gacgaaatcggtgcgatggctgccgcccttcaggtgttcaaggacggaatattgcgcaac
cgtgccctcgaagccgaagccgcggcaaaccgcgaaaaggccgaatccgaaaagctgcgc
cttcagcaggaggccgaagccgcagcgcagaagaaattgcaggaagccaccgcaggtctt
gcatctggcctgaagcgcctggctgctggcgacctcggctttgaactgaaagaacctttt
gcaccggaattcgaggctctgcgcctcgatctgaatgccgccgtcgcccaattgggcagc
acgattgcaaccgttgccacctctgccaacgctatcagcgacggctcacgcgaagtcagc
caaagtgcggatgatctgtccaagcggaccgaacagcaggccgcatcgctggaagaaacc
gccgccgccctcgaccagatcaccgtcaatgtcagcaattcctctcgccgggtggaagaa
gcgcgcggcgtggccaaggaagccaatagcagcgcggtgcattccggccaggtggttggc
gaagccatcagcgccatgcagcggatcgagcactcctccaaccagatctccaacatcatc
actgtgattgacgagattgccttccagaccaatcttctcgccctgaatgccggtgttgaa
gccgcccgtgcgggcgaagcgggccgtggctttgcggtggtcgccacagaagtgcgcgaa
ttggcgcaacgctcggccaaggccgcgcgcgaaatcaaggaactgatcaacaaatccacc
caggaagtggaaaacggcgttcgtcaggtgcaggaaaccggcgaggttctgaaagccatc
gagcagcacgtcacgacgatcaacggcctgatggacgccatcgccacctcctcgcgtgaa
caatcggtcggcctgtcagaggtcaacaccgccgtcaaccagatggaccaggtcacccag
cagaacgccgccatggtagaagaaaccagcgccgccagcgccaaccttgcgcaggaaagc
gtgcgtttgcagcaactggtctcccgcttcatcgttcccggcggatcgagaagcttcgac
aaccgctacgccgcctaa
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