Agrobacterium vitis VAR03-1: RvVAR031_12430
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Entry
RvVAR031_12430 CDS
T08810
Symbol
xylH
Name
(GenBank) sugar ABC transporter permease
KO
K10544
D-xylose transport system permease protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_12430 (xylH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_12430 (xylH)
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
RvVAR031_12430 (xylH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
BCH53633
UniProt:
A0A6S6MMF2
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All DBs
Position
1:complement(1380410..1381723)
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AA seq
437 aa
AA seq
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MVDHTLGAASSSARPSTVSPWRRFLNATEIDTRLMGMVVALLLIWFGFHILSDGLFLTPR
NLWNLSVQAASVSVMATGMVLVIVTRNIDLSVGSILGFVGMMMAVTQTKFLPVLLGYDHP
LMWVLALSLGIVIGAAIGAFQGVIIAFLNVPSFIVTLGGLLVWRGCAWMVTSGATVAPMD
TRFRLMGGGADGSIGATASWVVGVIACVFIVLSILHSRRQRKRFGFPLKPIWAEYFMGLI
GCGAVLGSVSVLNSYYMPVNLARKYAEANNIAWPDGGLEISLGIAIPVLIALGIAMVMNF
ITNRTRFGRYVFAIGGNPEAAVLAGIKTRWVTVRIFALMGALCAIAAAISTARLNAATNA
QGTLDELYTIAAAVIGGTSLAGGAGTIAGAVLGAIVMQSLNSGMVLLGMDTPLQSIVIGM
VLVVAVWLDTVYRARTR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcacacacttggcgcagcatccagcagtgcgcgtccgtcaacggtcagtccc
tggcggcggtttttgaatgccaccgaaatcgacacccggctgatgggcatggtggtcgcg
ctgctgctcatctggttcggctttcatattctgtcggatggactgtttctgacgccgcgc
aacctgtggaacctgtcggttcaggccgcgtcggtctctgtcatggccacgggcatggtg
ctggttatcgttacccgtaatatcgatctgtccgtcggatcgatcctgggctttgtcggc
atgatgatggcggtgacgcagaccaagtttctaccggttctgctcggctacgatcatccg
ctgatgtgggtgctggcgctctcgctcggcattgtcatcggcgcagcaatcggggcgttt
cagggcgtgatcatcgcctttctcaacgtgccgtccttcatcgtcacgctgggcggcctg
ctggtctggcgcggctgcgcttggatggtgacgagcggtgcgaccgtcgcgccgatggat
acccgctttcgcctgatgggcggtggcgcggatggctcgatcggggccaccgcgagctgg
gtggtgggggtcatcgcctgcgtgttcatcgtgttgtcgatcctgcattcccgccgtcaa
cgcaagcggtttggctttccgttaaagccgatctgggccgaatatttcatggggctgatc
ggctgcggcgcggtgctcggctccgtcagcgtgctcaacagttattacatgccagtcaat
ctggcccgcaaatatgccgaggccaacaatatcgcctggccggacggcgggctggagatt
tcattgggcatcgccattccggtgctgattgcccttggcattgccatggtcatgaacttc
atcaccaaccgcacccggtttggccgctatgtgtttgccatcggcggcaatcccgaagct
gccgtgctggcgggcatcaagacccgctgggtaacagtgcggatctttgcgctgatgggc
gcgctctgcgccattgccgcggcgatttccaccgcccgtctcaatgccgccaccaatgcg
caaggcacgctggacgagctttacaccattgccgcagcggtgatcggcggcacatcgctg
gccggtggagctggcaccattgccggtgcggtgctgggggccatcgtcatgcagtcgctg
aattctggcatggtgctgctgggcatggatacgccgctgcaaagcatcgtcatcggcatg
gtgctggtcgtcgcggtctggctggatacggtttaccgcgcccgcacccgataa
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