Agrobacterium vitis VAR03-1: RvVAR031_13240
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Entry
RvVAR031_13240 CDS
T08810
Symbol
hmrR2
Name
(GenBank) heavy metal-dependent transcription regulator 2
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avf03000
]
RvVAR031_13240 (hmrR2)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
avf01504
]
RvVAR031_13240 (hmrR2)
Transcription factors [BR:
avf03000
]
Prokaryotic type
Helix-turn-helix
MerR family
RvVAR031_13240 (hmrR2)
Antimicrobial resistance genes [BR:
avf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
RvVAR031_13240 (hmrR2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
AbiEi_4
DUF3723
DUF3150
Troponin-I_N
Motif
Other DBs
NCBI-ProteinID:
BCH53714
LinkDB
All DBs
Position
1:1461622..1462050
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AA seq
142 aa
AA seq
DB search
MNIGEAAAASGVSAKMIRYYEEIGLVLPARRTSSNYRVYGENEVHRLRFVRRARTLGFSL
EETERLLALWSDSGRRHDDVRQVAMNHLRELEDKMEAMQAMVDTLKNLVDHCEQGDRPDC
PILEKLGGSSTHNNRKVEMEEA
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcggagaagccgccgcagcctccggcgtttctgcgaagatgatccgctactat
gaggaaatcgggctggttttgccggcacggcgcacctcaagcaattatcgggtctatggc
gaaaatgaagtccatcgtctgcgctttgtgcgccgggcgcggaccctcgggttttccctg
gaggaaacggagcggctgctggcgctgtggagcgactctggccgcagacatgatgatgtg
cgccaagtggccatgaaccacctgcgcgaactcgaagacaagatggaagccatgcaggcc
atggtcgacacgttgaaaaacctggttgatcactgcgagcagggcgaccgcccggattgc
ccgatcttggaaaagcttggtggttcttccacgcacaataaccgcaaggtggaaatggaa
gaggcctga
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