Agrobacterium vitis VAR03-1: RvVAR031_13820
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Entry
RvVAR031_13820 CDS
T08810
Name
(GenBank) peptide ABC transporter permease
KO
K15582
oligopeptide transport system permease protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf01501
beta-Lactam resistance
avf02010
ABC transporters
avf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_13820
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAR031_13820
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RvVAR031_13820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_13820
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
RvVAR031_13820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
BCH53772
LinkDB
All DBs
Position
1:complement(1525106..1526227)
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AA seq
373 aa
AA seq
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MTDISITSPAVEGRSLGQLALLRFRRNRAAMGGCFVLLLITLFAFAGPLFVPHSYDQVFP
SYVSVPPSLKPFPDPATLQQVAEGAANRARLKISAFAVENGSFTATITSDKPIDPRTVRY
FDRVNEFKETRVAQTTPDQLSMVLTGRVSQEYFPFGTDSNGRDLLVRVMLGGQISIAVGL
AASLVSLGIGVIYGATSGYLGGRIDNVMMRIVEILYSLPFVFLVVVMVVFFGRSIWLIFI
VIGAVQWLEMARIVRGQTLSLKRREFVGAAEALGLNDWQIIRRHIIPNTIGPVIVFVTVV
VPQVILTESFLSFLGLGVQAPLASWGTLISEGAKNMQNAPWLLIFPAFFFVLTLFSLNFV
GDGLRDALDPKDR
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgactgatatttccattacctctccggcggtcgaaggccgcagccttggccagctggct
ctcttgcgctttcgccgcaacagagcggccatgggcggctgcttcgttttgctgctgatc
acgctctttgctttcgcaggtccgcttttcgtgcctcacagctatgaccaagtgtttccg
tcctatgtctcggtacctccgagcctcaagcccttcccggatccggccacgcttcagcag
gttgccgagggtgcggccaatcgtgcgcggctgaagatcagcgcatttgccgtagagaac
ggcagcttcactgccacgatcacgtcagacaaaccgatcgatccacgcactgtccgctat
ttcgaccgggtcaacgagttcaaggaaacacgagtcgcccagaccaccccagaccagctc
agcatggtattgacgggtcgcgtttctcaagaatattttccattcgggaccgatagcaat
ggccgcgatcttctggtgcgggtgatgctgggcggccagatttcaattgcggtcggcctt
gccgccagtctcgtatcgctcggcattggcgtaatttacggggccacctccggctatctc
ggcgggcggatcgacaatgtgatgatgcgcatcgtcgaaatcctctattcgctgcccttc
gtgtttctggtcgtggtcatggtggtatttttcggccgctccatctggctgatcttcatc
gtcatcggcgcggtgcaatggctggaaatggcccggatcgtgcgcggccaaaccctgtcc
ttgaagcggcgcgaattcgtcggcgctgcggaagcattagggcttaatgactggcagatc
atccgccgtcatatcattcccaacacaatcggcccggtcatcgtcttcgtcaccgtcgtg
gtgccacaggtgatcctcaccgaaagcttcctttccttcctcgggcttggcgtgcaggcg
ccgctggccagttggggaacgctgatttccgaaggggcgaaaaacatgcagaacgcgccg
tggctgctgatcttccccgcctttttctttgtgctgaccctgttttcgctcaatttcgtg
ggcgacgggctgcgcgatgcgcttgatcccaaggaccgataa
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