KEGG   Agrobacterium vitis VAR03-1: RvVAR031_14430
Entry
RvVAR031_14430    CDS       T08810                                 
Symbol
ntrR1
Name
(GenBank) ribonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
avf  Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:avf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:avf03016]
    RvVAR031_14430 (ntrR1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:avf02048]
    RvVAR031_14430 (ntrR1)
Transfer RNA biogenesis [BR:avf03016]
 Prokaryotic type
  tRNA degradation factors
   RvVAR031_14430 (ntrR1)
Prokaryotic defense system [BR:avf02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    RvVAR031_14430 (ntrR1)
SSDB
Motif
Pfam: PIN PIN_12
Other DBs
NCBI-ProteinID: BCH53833
LinkDB
Position
1:complement(1586882..1587298)
AA seq 138 aa
MGFMLDTNIVSDMVRNPDGPAMERWKQTGYADLHLSAIVVSELYFGIQKRESERLRRGVE
TFLNTVVIEAFEGRAAHYYASIRNALAKAGEMIGPNDLFIAAHALSLDMVLVTNNTREFA
GVSGLKLENWLETTHEGQ
NT seq 417 nt   +upstreamnt  +downstreamnt
atgggatttatgttggataccaatatcgtctccgacatggttcgaaatcctgatgggcct
gccatggaacgctggaaacaaacaggctatgcggacctgcatctcagcgccatcgtcgtc
tccgaactctactttggtatccaaaagcgtgagtcggagcgattgcgacggggtgttgag
acgtttctgaacactgttgtgatcgaggctttcgaggggcgcgctgcccattattatgcc
agcattcgcaacgctctggcaaaggctggcgagatgattggtcccaacgacctgttcatt
gccgcccacgcgctgtcattggatatggttctggtcaccaacaatacccgcgaatttgcc
ggtgtatccgggctgaaactggaaaactggctcgaaaccacacatgaggggcaatag

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