Agrobacterium vitis VAR03-1: RvVAR031_14780
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Entry
RvVAR031_14780 CDS
T08810
Name
(GenBank) 4-amino-4-deoxychorismate lyase
KO
K07082
peptidoglycan lytic transglycosylase G [EC:
4.2.2.29
]
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avf01011
]
RvVAR031_14780
Enzymes [BR:
avf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RvVAR031_14780
Peptidoglycan biosynthesis and degradation proteins [BR:
avf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RvVAR031_14780
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YceG
Motif
Other DBs
NCBI-ProteinID:
BCH53868
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All DBs
Position
1:1623599..1624837
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AA seq
412 aa
AA seq
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MSDRVDQEANRSSNGGEQQPQNQNQAAKGPFIPKSPSEALRPERVPQPPRRSRRARSQVV
VFLNFVMTLLVFACIAAVAAFYYVVAAFQDPGPLSTNANFLVRNGAGVSEIATSLERNGM
ISDARIFRYMTSTYLHDGDTLKAGEYEIKAGASMKDILELLRSGKSILYSVTLPEGLTVK
QMFDRLAKDETLEGDLPKALPPEGSLRPDTYKFTRGTKRQEVVDQMLDGQKRLVDQIWAN
RSPDLSLKTKEQFVVLASIVEKETGKDDERAHVASVFLNRLQKGMRLQSDPTIVYGLFGG
DGKPADRPIFQSDLQKQTPYNTYVIKGLPPGPIANPGRAALEAVANPWRTSDLYFVADGT
GGHVFASTLDEHNANVRRWRKLEADRGADPGQAVDGQPEADPDQAPKPVKKK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatcgcgtcgaccaggaagccaaccgttccagtaatggtggcgaacagcagccc
caaaatcaaaaccaggcggcgaaagggcctttcatccccaaatcgccctcggaagccctg
aggccggagcgggtgccgcaaccgccgcgtcgatcccggcgcgcccgaagccaggtggtg
gtgttcctgaatttcgtgatgaccttgctggtctttgcctgcattgccgcagttgctgcc
ttttattacgtggtcgctgcgtttcaggacccgggtccgctctccaccaacgccaatttt
ctggttcgcaacggcgcaggcgtgtccgaaatcgccaccagccttgagcgcaatggcatg
atttccgatgcgcggattttccgttacatgacatcgacctatctgcatgatggcgatacg
ttgaaggctggcgaatacgagatcaaggctggcgcctcgatgaaggatattctcgagctg
ctgcggtcgggcaaatccattctctattcggtgacgctgccggaggggctgacggtcaaa
cagatgttcgaccggctggccaaggatgagacgctggaaggcgatctgcccaaggcgttg
ccgccagagggaagcttgcgcccggatacctataaatttacccggggcaccaagcggcag
gaagtcgtcgaccagatgctcgacggacagaaacgtcttgtcgatcagatctgggccaat
cgttcccccgacctgtccttgaagaccaaggagcaattcgtggttctggcctccattgtc
gagaaggaaaccggcaaggatgatgagcgcgcccatgtggcctcggtgttcctcaaccgg
ctgcaaaagggcatgcggctgcaatcggacccgaccatcgtctatgggttgttcggcgga
gatggcaagcctgccgaccggccgatcttccagtcggacctgcagaagcagacgccctat
aatacctatgtgatcaagggcctgccaccgggaccgattgccaatccgggccgcgcggcg
ctggaggcggttgccaatccctggcgcacctccgatctgtatttcgtcgcggatggcaca
ggcggtcacgtctttgcatcgaccctcgatgagcataatgccaatgtcaggcgctggcgc
aagctggaggcggaccggggtgcagatcctggccaggccgtcgatggccagcccgaggcg
gaccctgaccaggctccgaaaccggtgaagaaaaaataa
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