Agrobacterium vitis VAR03-1: RvVAR031_14860
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Entry
RvVAR031_14860 CDS
T08810
Name
(GenBank) LPS export ABC transporter permease LptG
KO
K11720
lipopolysaccharide export system permease protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_14860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_14860
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
RvVAR031_14860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
FtsX
SecE
Motif
Other DBs
NCBI-ProteinID:
BCH53876
LinkDB
All DBs
Position
1:complement(1632938..1634026)
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AA seq
362 aa
AA seq
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MMLNTLSRYFLKRYAITVFWFVIGVAAIIFLIDFSEVSGRFSDNEQSSLFGVFLLTLMRL
PLLLQQTVPFIALFSGMVTLITLNRRSELVIARAAGISVWQFMFPFLLGAFLLGCATSLL
INPLAALGQKQAATLEAEYSDPGKASNNKNSVPWMRQITGKEDTIIGATSVLEDGTLLMQ
AVFIHFDGQGRITSRQDARTAKLQDGYWLLKDVVETKPGETPRRESSAQVSTNLKQEFVQ
ERLAQPDTVAFYELSQKIAVAKSYGVSTKNLETQFHTLLSTPFLFVAMTLIAATVSLKFS
RFNQSRSVILGGIISGFVLYVATVLVKAFGSSGVVPPFVATWVPVIVATALGATILLHQE
DG
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcaacacgctcagccgctattttctcaagcgctatgctatcaccgtcttctgg
ttcgtgatcggcgtcgcggcaatcattttcctgatcgacttcagcgaagtcagcggccgg
ttctccgacaatgagcaatcctcactgttcggcgtcttccttctgacgctgatgcgcctg
ccgctgctgctacagcagaccgtacccttcatcgcgctgttttccggaatggtcaccctg
atcacccttaacaggcgctccgaattggtgattgcgcgtgccgcgggtatttcggtctgg
cagttcatgttccccttcctgctaggcgctttcctgctcggctgcgccacatccctgctc
atcaatccgcttgccgctctcgggcagaaacaggccgcgacactggaggccgaatacagc
gaccccggcaaggccagcaataacaagaactccgtgccatggatgcgacagatcaccggc
aaggaagacaccatcatcggcgcgacctcggttctggaagatggtacgttactgatgcag
gcggtgtttatccacttcgatggacagggtcgaattacctcccgtcaggatgcacgcaca
gcgaagttgcaagatggttactggttgcttaaggatgtcgtcgagaccaagcctggcgaa
acgcccaggcgcgagtcctcggcacaagttagcaccaatttgaaacaggaatttgtacag
gagcgtctcgcacagccggatactgttgctttttatgaactttctcagaaaatcgcagtt
gccaaatcctatggtgtctcaacgaagaatttggaaacgcagtttcatacactgctctcc
actcccttccttttcgttgcgatgactctgattgctgcaactgtttctctcaaattcagc
cggttcaaccagtcacgttccgtgattctgggtggaatcatttcgggcttcgtgctttat
gtggcgacagtgctcgtgaaggcgttcggaagcagtggcgttgtgcctccgttcgttgcg
acctgggttcctgtcatcgttgcgacagcgctcggggcgacgatcctgcttcatcaggag
gatggttag
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