Agrobacterium vitis VAR03-1: RvVAR031_14870
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Entry
RvVAR031_14870 CDS
T08810
Name
(GenBank) permease
KO
K07091
lipopolysaccharide export system permease protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_14870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_14870
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
RvVAR031_14870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
LNT_N
Motif
Other DBs
NCBI-ProteinID:
BCH53877
LinkDB
All DBs
Position
1:complement(1634023..1635207)
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AA seq
394 aa
AA seq
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MKLLESYILRRVAQMFLTALLPVLAIIWTTQVLARINLVTDTGQSVGSFATLATLILPTI
IPIVMPFALVIGITQSLTAMNNDSELAVIDAAGASRAVILRPILLFAMAISVITLVITNE
VQPKVKVAARQMIANAYADLLSTVIEEKTFRKVEDGLYVQISQRLAGRVLKGLFVADYRD
PAYSLIYYAREGAVDETGTALIMHDGEVQRKAPGGTVSIVRFDSYAFDLSDLTETRGKAK
MRPSDRSLGFLLNPDTNDDDYKDHPGEYRAELHKRMTEWLLPFAFALMSLAIAGDARSHR
EARLHPMVAALTIALILRWLTFYAANKSESNAAFIVLMYATPLATAAIATLMLMRQKKSQ
LPAPLRRVIEATRLAFQRRFTSNSANGQDNGGSA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcttgagtcctatatattgcggcgtgtcgcgcagatgttcctgacggcactt
ctgcccgtgctggcgatcatctggacaacgcaggtcctggcacgcatcaatctcgtgacg
gataccggacagtcggtcggctccttcgccacgctggcaacgttgattctgcccaccatc
attcccatcgtcatgccgttcgcgctggttattggcattacccagagcctgacggcgatg
aacaacgattccgaactggccgtcattgacgccgccggtgcatcgcgtgcggtcattctc
cggccgatcctgctgtttgcaatggccatcagcgtcatcacgcttgttatcaccaatgaa
gtgcagccgaaggtgaaggttgccgcacgccagatgatcgccaatgcctatgcagacctt
ctgtcgacggtgatcgaggaaaaaaccttccgcaaggtggaagacggtctctatgtgcag
atttcccagcgactggccgggcgtgtcctgaaggggctgttcgtcgccgattaccgcgat
ccggcctattcgctgatctattatgcccgcgaaggcgcggtggatgagacggggaccgcc
ctaatcatgcatgacggcgaggtccagcgcaaagcaccgggcggcacggtttcgatcgtt
cgcttcgattcctatgccttcgacctgtccgacctgacggaaacccggggcaaggctaaa
atgcggccaagcgaccgcagcctgggcttcctgctcaatccggatacaaatgacgacgat
tacaaggatcacccgggcgaataccgggcggagctgcacaagcgcatgacggaatggctg
ctgccctttgccttcgcgttgatgtcgctggccatcgccggcgatgcgcgctcccacaga
gaggcgcggctgcatcccatggtcgcggcgttgaccatcgcgctgatcctgcgctggctg
accttctatgccgccaacaagtccgaatcgaatgccgctttcatcgtcctgatgtatgcg
acaccgctcgccactgcggcgattgccaccctgatgctgatgcgccaaaagaagtcgcaa
ttgccggctcccctgcgccgcgtgatcgaagcaacacggttggccttccagcggcgattt
acctccaatagcgctaacggccaggacaatggaggcagcgcatga
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